| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4160 |
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| Symbol | |
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| ID | 4668464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4612804 |
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| End bp | 4614540 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639825347 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_972475 |
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| Protein GI | 120612797 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00895585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACCA CCATCCTTCC CGACCGTACA GAGCCGACCG CCGATGCCGT CGCCGTGCAG
CAACCCCTGC TGGGCGAGTT GCTGGTCCAG TCGGGCAAGC TGAGTGCGCG GGACCTCGAG
CGCGCGCTCT CGGCGCAGCA GGAAATGGGC GGGCTGCTGG GCCGCGTGCT CGTGCGGCTC
GGCCTGGTGT CCGAAACCGA CGTGATCCAG GCGCTCTCGC GCCAGTTGGG CATCCCGCTC
ATCTCCGCCA ATGACTTTCC CGACCTGATG CCGGAGGTGG AAGGCCTGCT GCCGGAGTTC
CTTCAGGCCA ACAGCGTGTA TCCGCTGTCC GTCGAAGACG GCAGGCTGCA TGTGGCCATG
GCGGTGCCTC AGGACGCTTT CGTCGTGAAG GCGCTGCATC TGGCGACCGG CCTGTCCGTG
GTGCCGCGCC TGGCGCTCGA AAGCGATATC GAGAAGGCGC TCGCCGAACC GGTGGAACAG
GCGGGCGAGG AAGAGGGCGA CGACGGATTC GGCGACGGAG CCGATGGGGG CGACTTCGTC
GAGCACCTCA AGGACCTCGC CAGCGAGGCA CCCGTCATCC GCCTGGTCAA TGCCATCATC
GGCCGCGTCA TCGACCTGCG CGCTTCGGAC ATCCACCTGG AGCCCTTCGA CGACGGCCTG
CACGTACGCT ATCGCGTGGA TGGCGTCATC CAGCTCGGCG AACTGGTGCC CCCGCGCCTG
AGCGCCGCAG TCAGCTCGCG CGTCAAGCTG CTGGCCCATC TGGACATCGC GGAACGGCGC
CTGCCCCAGG ACGGGCGCAT CAAGACGCGG GTCAAGGGGC GCGAGCTGGA TCTGCGCGTT
TCCACCGTGC CCACCGTGCA CGGGGAGAGC GTGGTCATGC GGGTGCTGGA CCGCGCGAGC
GTGCGCCTGC AACTGGAGAC GATGGGGTTC GAGAAGGACA CGCTCGAGCG CTTCAACATG
CTGCTGGCCA AGCCGCACGG CATCCTGCTG GTGACCGGCC CGACCGGCTC CGGCAAGACC
ACCACGCTGT ATGCGGCGCT GTCCAAGATC GATGCGGAAT CCAACAAGAT CATCACCGTG
GAAGACCCGG TGGAATACCA GTTGGAAGGC ATCAACCAGA TCCAGGTCCA TCCGCAGATC
AACCTGACCT TCGCCAACGC GCTGCGCTCC ATCCTGCGCC AGGATCCGGA CATCATCATG
ATCGGTGAAA TGCGGGACGG CGAGACCGCG CAGATCGCCG TGCAGTCCGC CCTCACGGGC
CACCTGGTGC TGTCCACCCT GCACACGAAC ACGGCCGCAG GCGCGGTCAT CCGGATGAAG
GACATGGGCG TGGAGGGGTA CCTGATCACG TCTTCCGTCA ACGGCGTGCT GGCCCAGCGG
CTCGTGCGCA CGCTGTGCAG CCACTGCAAG GAGCCCTACG AGCCGGGCGA CGAGGTCCGG
CGCACCACGG GGCTGCACCG TTTCAGCACG TTCGGTCAGG CGATCTACCG CGCCGTCGGC
TGCGAGCACT GCCGCGGCTC CGGCTATCGG GGGCGCACGG GCATCCATGA GCTGTTCGTC
CTGGACGAGC CCATGCGCCG CGCGATCATC GACGGCAAGG ACGCCAATGC CCTCAACACG
CTCGCGGCGC AGGGCGGCAT GCTCAACCTC TACGAGGACG GCCTGCGCAA GGTGGCGGCC
GGCATGACCA CGCTGGACGA ACTGAGCCGC GTGACGCAGG ACCAGGGCGA TGCCTGA
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| Protein sequence | MTTTILPDRT EPTADAVAVQ QPLLGELLVQ SGKLSARDLE RALSAQQEMG GLLGRVLVRL
GLVSETDVIQ ALSRQLGIPL ISANDFPDLM PEVEGLLPEF LQANSVYPLS VEDGRLHVAM
AVPQDAFVVK ALHLATGLSV VPRLALESDI EKALAEPVEQ AGEEEGDDGF GDGADGGDFV
EHLKDLASEA PVIRLVNAII GRVIDLRASD IHLEPFDDGL HVRYRVDGVI QLGELVPPRL
SAAVSSRVKL LAHLDIAERR LPQDGRIKTR VKGRELDLRV STVPTVHGES VVMRVLDRAS
VRLQLETMGF EKDTLERFNM LLAKPHGILL VTGPTGSGKT TTLYAALSKI DAESNKIITV
EDPVEYQLEG INQIQVHPQI NLTFANALRS ILRQDPDIIM IGEMRDGETA QIAVQSALTG
HLVLSTLHTN TAAGAVIRMK DMGVEGYLIT SSVNGVLAQR LVRTLCSHCK EPYEPGDEVR
RTTGLHRFST FGQAIYRAVG CEHCRGSGYR GRTGIHELFV LDEPMRRAII DGKDANALNT
LAAQGGMLNL YEDGLRKVAA GMTTLDELSR VTQDQGDA
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