| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4159 |
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| Symbol | |
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| ID | 4668594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4611528 |
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| End bp | 4612811 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825346 |
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| Product | type II secretion system protein |
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| Protein accession | YP_972474 |
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| Protein GI | 120612796 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00287604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGACT ACGCGTGGCG CGCCGTCGCC GCATCCGGCA AGGTCGTCGA AGGCCGGCAG
ACCGCGCCGA GCGAGGCGCA GGTGCTCAAG CAATTGCGCG AGCAGGGCCT CACGCCCCTG
GGCATCAGCG ATGCCGCGGG GGCGCCTCCG GTCGCCGCGG CCTCCGAGCG CGGCGCGGGC
AAAGGCGTCG CCGCAACCGC CGCTGCCGCC GGCGTGGTTC CCGCGCCCCG CGGGCGCGGC
AGCAAGGGCC CCGTCAAGCA GGCGGACGTG CTCGCCCTCA CGTCGGAACT CTCCATCATG
CTGCGCGCCG GCCTGGCGCT CGACAACGCC CTGCGCGTGC TCATCGACAT GAGCCACAAG
CCCAGCATGG CCACGCTGCT CCAGGGTGTG CTGGACGCGG TCAAGGGCGG CACGCCACTC
AGCCGGGCAC TCGCGCAGCA CCGGGACCTG TTCGGCGACT TCTACATCAA CATGATCCGC
TCGGGCGAGG CGAGCGGCCA GATGTCCGCC GTGCTCGAGC GACTCGTCGC CCACATGGAG
CGCCAGCGCG CCCTGCGAGA CAGCGTCATC TCGGCCACCA TCTACCCGGC CATCCTGCTG
GGTGTCGCGG TGCTGTCGCT GATCGCCATG CTGGGCTTCG TCGTGCCGCA GTTCGAGAAA
CTTTTCACCG ATATGGGCGA CGCGCTTCCC TTGCCGACCC AGATGGTGAT GGCCCTGGGC
CATGCCTTCA CCCGCTACGG CCTCCTGATC GGCATCGCGG CGCTGGGGCT CGGGCTGCTC
GTGCGCCGCT GGGTCACGTC CCCGGCCGGC CGCATGTGGT GGCAGTCGCG CCTTCTGAAA
ATGCCCCTCA TGGGGCCGCT GGCCCTCAAG TACCAACTGA CACTGTTCTC CCGCTCCCTG
GGCACGCTGC TCGGCAACGG AGTACCGATG CTCACGGCCC TGCACATCGC CACCGAGACG
GTGAACAACA CCGTGCTCCA GCAGTCGCTC TCCAAGGTGG CTCCCATCGT GAAGGAGGGT
GGCAAGGTGG TGCAGGCCAT CACCGCCACC GGCATCTTCG AGCCCATCGC GATCAACCTG
ATCCGCGTGG GGGAAGAGAC GGGGCGCATC GGCCAGATGA TGCTCGAGCT GTCCAACATA
TTGAACCGCG AGGTCGAAAC CGGTATCAAA CGCCTTCTCA CCCTGGTCGA GCCCGTGCTG
ATCCTGGTGC TGGGCGTGCT GATCGCCGCC ATCATCGTCT CCATCCTTCT CGGTATCCTG
TCCATCAATG ACCTCGCCGT ATAA
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| Protein sequence | MPDYAWRAVA ASGKVVEGRQ TAPSEAQVLK QLREQGLTPL GISDAAGAPP VAAASERGAG
KGVAATAAAA GVVPAPRGRG SKGPVKQADV LALTSELSIM LRAGLALDNA LRVLIDMSHK
PSMATLLQGV LDAVKGGTPL SRALAQHRDL FGDFYINMIR SGEASGQMSA VLERLVAHME
RQRALRDSVI SATIYPAILL GVAVLSLIAM LGFVVPQFEK LFTDMGDALP LPTQMVMALG
HAFTRYGLLI GIAALGLGLL VRRWVTSPAG RMWWQSRLLK MPLMGPLALK YQLTLFSRSL
GTLLGNGVPM LTALHIATET VNNTVLQQSL SKVAPIVKEG GKVVQAITAT GIFEPIAINL
IRVGEETGRI GQMMLELSNI LNREVETGIK RLLTLVEPVL ILVLGVLIAA IIVSILLGIL
SINDLAV
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