| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4157 |
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| Symbol | |
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| ID | 4669421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4610571 |
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| End bp | 4611017 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825344 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_972472 |
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| Protein GI | 120612794 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000758704 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGGCGCG AGCGCGGCTT CACGCTGGTT GAGTTGCTGG TCGTCTTCGC CATCATGGCG
CTCGTGGTGG GCCTTGCGCC CTTCGCATTC GAGCGCCTGC GCGAAGCCTC GTCCTACCGC
GACGCCGTCC GCACCATGTC CAGCCAGATG CGCTCGGCCC GCTTCCAGGC CATGGCCGAA
GGGCGTGAAG TGCTCTTTTC GGTCGATCTC CGCAACCGTC TCTACGGGGT GGATGCTGCC
TTGAAGCCTT TGCCCGAGCC GCTGCAGATG CGGGCCATCG TGGCCCGCTC GGAACTGGAT
CCGCAAAGCC GGGCATCCAT CCGCTTCCTG CCCAGTGGAG GCGCCACGGG GGGCAGCATC
GAGATCCTCC GGGCGCCCGG CGTAGGCACG CGCCTGCGGG TGGACTGGCT TTCCGGCCGG
GTGACGCAAG AGGCGCTGAC CCGATGA
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| Protein sequence | MRRERGFTLV ELLVVFAIMA LVVGLAPFAF ERLREASSYR DAVRTMSSQM RSARFQAMAE
GREVLFSVDL RNRLYGVDAA LKPLPEPLQM RAIVARSELD PQSRASIRFL PSGGATGGSI
EILRAPGVGT RLRVDWLSGR VTQEALTR
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