Gene Aave_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4037 
Symbol 
ID4666535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4489067 
End bp4489558 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID639825224 
ProductAsnC family transcriptional regulator 
Protein accessionYP_972352 
Protein GI120612674 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.42477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC TTGCACTCGA CGCCACCGAT ACGCGTCTGC TCGACCTGCT GCAGACCGAC 
GCGAGCCTGA GCAACCAGGC CCTGGCAGAA CTGGCGCACG TCTCTCCGCC GACATGCCTG
CGCCGCATCA AGCGGCTGCA TGACCTCGGG CTGGTGGAAC GGCAGGTAGC CATCCTGCGG
CCCGACCGGC TGGCACAGCT GCAGGGCCAC GGGCTGACGG CCTTCGTCGA GGTGACGCTG
GACCGCCAGG GGGCGGAAAT GCTGGATGCC TTCGAGGCGC GGGCCGTGGC CGACGGGGCG
GTGCAGCAAT GCTGGCGCGT GGCGCCGGGC CCGGATTTCA TGCTGGTGGT CCACACCCCG
GACATGCCCG GCTACCTGGC GCTCACCCAG CGGCTCTTCA CGGGCGATGC GAACGTGCGC
AACGTGAAGG CGTTCTTCGG CGTCAAGCGC GCCAAGTTCG ACACGCGCAT TCCGCTCTTG
CGGGGCGAAT GA
 
Protein sequence
MESLALDATD TRLLDLLQTD ASLSNQALAE LAHVSPPTCL RRIKRLHDLG LVERQVAILR 
PDRLAQLQGH GLTAFVEVTL DRQGAEMLDA FEARAVADGA VQQCWRVAPG PDFMLVVHTP
DMPGYLALTQ RLFTGDANVR NVKAFFGVKR AKFDTRIPLL RGE