| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4034 |
|---|
| Symbol | |
|---|
| ID | 4666567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4484520 |
|---|
| End bp | 4486049 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639825221 |
|---|
| Product | NADH dehydrogenase subunit L |
|---|
| Protein accession | YP_972349 |
|---|
| Protein GI | 120612671 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.190531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.750928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCT CGCCACCATG GCGACCCATG CAAGACCTCG ACTTTCTTCT CTCCATTGCT
GCCCTGTTGC CCGCGGCGCT GATGCTGTGC GCCGCGGCCG GGCTGTCGCT TCACCGGGGT
GCGGTGCGCC CTGCCTGGCG GGCGCTGCAC GCGGCATCTG CGCTCGGCCT GATGGCCGCG
CTGGCCGCGC TGGTCGCCGT GGCCACCGGT GCGTCCGCAC CGCTCGCTCC CTGGCTGCGC
CCGACGCTGC CGGGCACCGC CGTGGCGGTG CTCGTGCAGG CGCTGGGCGG GGTGGTGGGC
GTGTTCTCGA CCCGCTACCT GGACGGCGAG CCGCGCCAGG CCCGCTACGC CGCCGCGCTG
GCCGCGGTAT TGGGCGGCGT GCAGGTGCTG CTGCTGGCCG ACCACTGGGC CGTGCTGATC
GCCGCCTGGG CCGGCATCGG CCTGGCGCTG GAGCGGCTGC TGTGCTTCTA TGCCGACCGC
CCGTTCGCGC TGCTGGCCGC GCACAAGAAG CGCGTGGCCG ACCGCGCGGC CGATGGGCTG
CTGGTCGCTG CCGCGGCGCT GAGCTGGCAT GCGGTGGGCA GCGGCTCGCT GAGCGACCTG
GCGGCCCATG TGCAGGCCGC GGGCCTGTCG GCGCCGCTGC AGGTGGCGGC CGTGCTGCTG
GTGGCCGCCG TCGTGTTGCG CACCGCGCTG ATGCCGGTGC ACGGCTGGCT GATCCAGGTG
ATGGAGGCGC CCACGCCGGT GTCGGCGCTG CTGCATGCCG GTGTCGTGAA CCTGGGGGGC
GTGGTGCTGA TCCGCTGCGC GCCGCTGCTG GAACACGCCA TGCCGGCGCG CGCCATCCTC
GTCGCGCTGG GCCTGCTGAC GGCGCTGGGC GCCGGCCTGG TGATGCTGAC CCGCATCAGC
ATCAAGGTGC GGCTGGCCTG GAGCACCGTG GCGCAGATGG GCTTCATGCT GGTGGAATGC
GGCCTGGGTC TCTACACCCT CGCGGCGCTG CACCTGCTGG GCCATTCCAT TTACAAGGCG
CATGCCTTCC TGGCCGCGTC CGACGTGGTG CGGCAGACCC GGGCGCGTGC GCTGCGGCCG
CCGCAGTTGC CGGCCCGCGC CAGCCTGCTC GCCGCGCCGC TGCTGGCCGG GGCGGTCGTG
GCGGCTGTGG GCGGCGGCTG GCCGCTGTGG TGGACGGGTG TGATGGCGCT GGCCTGGGCA
CCGCTGCTGT GGGCATCGAC GCTGCGGCAG CTGGTCGCCG GGCTGGCCGC CACGGCGCTG
CTGACGGCCG TGGCCCGCGC CGCCCACGCG CTGCCGCTGG GCCTGCACGA CGCGCCGCAT
GACGCGCTGG GCTTCCTGGC CCTGGCCGGC ATGGCCGCGC TCTACGCCGT GCTCGTCGCG
CTGCAGATGC GCCCGCAGGC ACTGCTCACC GCGCGCCGCT GGAGCTACGC CGGCTTCTAC
CTCGACGAGT TCTATACCCG CTGGAGCCTG CGCCTGTGGC CGCGCCGCTG GACGCCCACG
CCGCCCCCAC CGCGCCCCGC CACGATCTGA
|
|---|
| Protein sequence | MCGSPPWRPM QDLDFLLSIA ALLPAALMLC AAAGLSLHRG AVRPAWRALH AASALGLMAA
LAALVAVATG ASAPLAPWLR PTLPGTAVAV LVQALGGVVG VFSTRYLDGE PRQARYAAAL
AAVLGGVQVL LLADHWAVLI AAWAGIGLAL ERLLCFYADR PFALLAAHKK RVADRAADGL
LVAAAALSWH AVGSGSLSDL AAHVQAAGLS APLQVAAVLL VAAVVLRTAL MPVHGWLIQV
MEAPTPVSAL LHAGVVNLGG VVLIRCAPLL EHAMPARAIL VALGLLTALG AGLVMLTRIS
IKVRLAWSTV AQMGFMLVEC GLGLYTLAAL HLLGHSIYKA HAFLAASDVV RQTRARALRP
PQLPARASLL AAPLLAGAVV AAVGGGWPLW WTGVMALAWA PLLWASTLRQ LVAGLAATAL
LTAVARAAHA LPLGLHDAPH DALGFLALAG MAALYAVLVA LQMRPQALLT ARRWSYAGFY
LDEFYTRWSL RLWPRRWTPT PPPPRPATI
|
|---|
| |