Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4029 |
Symbol | |
ID | 4667094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4476911 |
End bp | 4477861 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825216 |
Product | ribonuclease BN |
Protein accession | YP_972344 |
Protein GI | 120612666 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.394592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGAAA AAAATCTCAA GAGTTCATGG GCCCTTGTCA AACAGGCGGC CTCGTCGTGG GTGGATGACT ACGCGCCGAG CATGGGCGCA GCGCTGTCTT ACTACAGCGT GTTCTCGCTC GCGCCCTTGC TGGTGATCGT CATTTCCATC GCGGGGCTCG TGTTCGGGGA AGAGGCCGCG CGCGGCGAGG TATTCGCGCA GCTCAGCGGC CTGATGGGCA CGGATGCCGC CGCGGCGGTG GAGGAATTGC TCAATGCCGC CGCCAGGCCC GCGACGGGCG TCGCTTCTGC CGTGATCGGG CTGGGCGTGC TGCTGGTCGG CGCCACCACC GTGTTCGGGG AATTGCAGGA CGCGCTGGAC CGCATCTGGC GGGCACCGGT GCGTGAAGGG GCCACGGGGC TATGGGGGCT GCTTCGCGCG CGGTTCCTGT CGTTCGGGAT GATCCTCGGC ATCGCGTTCC TGCTCATGGT GTCGCTCGTC ATGAGCGCGG CGGTGTCGGC GCTGGGCAAG TGGTGGGCGC CCGCGTTCGG CGGCTGGGAG GTGCTGGCGC AGGCGATCAA CGCGGCGGTG GGCTTTGCGC TCACCACGGT GGTGTTCGCG ACGATCTACA AGATCATGCC GCGCGTGAGC GTGCGCTGGC ACGACGTCTG GCTGGGCGCC GCGATCACCG CGGTGCTGTT CACCGTGGGC CGGATGCTCA TCGGGCTCTA CATCGGCAAG ACCGCGCTGG CTTCCGGCTT CGGTGCCGCG GGGTCGCTGG TGGTCATTTT CGTGTGGGTG TACTACTCGG CGCAGATCTT CCTGATGGGG GCTGAATTCA CATGGGTGTA TGCGCGCACC TTCGGATCGA TGCGGGAGCG CGTGGAGGAC CGGGTATCGC CTGCCGGCGG CGGGAGCGAT GCGGGCGTGG ACCCGGAACT GCCCGGAGCG GGTGCCGGCC CGCCACGATG A
|
Protein sequence | MPEKNLKSSW ALVKQAASSW VDDYAPSMGA ALSYYSVFSL APLLVIVISI AGLVFGEEAA RGEVFAQLSG LMGTDAAAAV EELLNAAARP ATGVASAVIG LGVLLVGATT VFGELQDALD RIWRAPVREG ATGLWGLLRA RFLSFGMILG IAFLLMVSLV MSAAVSALGK WWAPAFGGWE VLAQAINAAV GFALTTVVFA TIYKIMPRVS VRWHDVWLGA AITAVLFTVG RMLIGLYIGK TALASGFGAA GSLVVIFVWV YYSAQIFLMG AEFTWVYART FGSMRERVED RVSPAGGGSD AGVDPELPGA GAGPPR
|
| |