| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3998 |
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| Symbol | |
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| ID | 4669926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4434811 |
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| End bp | 4436586 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825186 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_972314 |
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| Protein GI | 120612636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC GCCGGCATTC CGCAGCGCGA CGGCACGCCC CCCTCCGGCG GACCGACAAT
GCGGCCATGC ATCCGATTGC CCGGCCGTCC CTCCGCCCCT CCAGCCTGCG GGGACAACTC
ACCCTCTGGT TCGGTGCGCT CACGCTCGCC AGCGTGCTGG GCGTGGGCTT CTACCTGGGA
CGCATCGCCA CGCAGGACCT CGCGCGCTTC GCGGGGGACC TGCTGCACAC CACGGCCCGC
TCGGCCACCG ACCTGCTCGC CACCAACCTG CGCGAGCGCG CGCTCGAGAT CGACCTGCTG
CGCCAGCTGC CGCTGTTCAC CCAGGGCGAC CTGGGCGGCG AGGCCATGCG CCGGGCGCTC
GACCAGCGCA AGGACGCGCA CAGCGAGTAC GCATGGATCG GCATCGCCTC CCCGGAAGGC
CGGGTGCTGC AGGCCACGGG CGGCCTCCTC GTCGGAGAGA AGGTGGACCA GCGCCCCTGG
TTCCGCGACG CCACCACCCG TCTTTTCGTG GGCGACGTGC ACGACGCCGT GCTGCTGGCC
AAGCGCCTGC CGGAACGTCG CCTCGACCAG CCGCTGCGCT TCATCGACTT CGCCGCGCCC
ATCGTGGACG CCAACGGAAC GCTGCGCGGC GTGATCGGCG CCCATGCCCA CTGGTACTGG
GTGACCGAAA CCGTGGAGGC GGTGGCCGTG GACCGTGCGG CGGGGCCCGG CATCGAGGTG
CTCATCGCCG ACCGGTCGGG CAATGTGCTC TATCCCTTCC GGCTCGCGGG CCAGAGCCGC
CTGCCGGACC GGGCCGCTGC GTCCGCGCGC TACGAGCGCC TCACGTGGGC CGACGGCACG
GAATACCTGA GCAGCACGGT CCCGCTGCCA TCCGTGGCGG GCGCGGACCT CGGCTGGCGC
ATCGTCGTGC GCCAGCCCGC GGACGAGGCG CTGGCGCCGG CCCGTGCCCT GCGCCGCCAG
CTCGCGCTGC TGGGGCTGGC CGCCGCCCTG CTCTGCGGCC TGGTGGCCTA CCGGCTCGCG
GCGCGGTTCA GCCGGCCGCT GGAACTGCTG GCGCGCGCGG CGCACGCCAT CGAGCGCCGG
GAGGGCGTGC CCCGCTATCC CGACGGCACG GACACCCTCG AAGTCGCCCA GCTGAACCGT
TCCTTCCAGT CCATGACGGC CTCGCTGCTG GAGCGCGAGC AGGAGCTGTC GCGCCTCAAT
ACCTCCCTGG AGAACCAGGT CCGCGAACGC ACTCTGGCCC TGCACCAGGC CAACCAGGAA
CTCGAGAACC TGGCGGTGCG CGATCCGCTC ACCGGGCTCT ACAACCGCCG CCGCTTCGAC
GAAGCGCTGC AGGCGTACAC GGCGCGGTGC CGCGAGCTCG GCCACCGGTT CGCGCTGATG
ATCGTGGATG CGGACCACTT CAAGCGCGTC AACGACACGC ACGGCCACCA GACGGGCGAC
GCGGTGCTGC GGCACCTGGC GGGCGTCATC ACCGGCTGCG TGCGCTCCAC GGACTTCATC
GCCCGGTTCG GCGGCGAGGA GTTCGTCGTG CTGATGCCCG AACCCCGCGA CCGCGAGGAA
GGCCGGTTCG TGGCAGAGAA GATCCGCCTG GCCGTGGGCC ATACGCCCTT CCCCGGCGTG
GGCCACCTGA CGGTCAGTAT CGGCCTGGCC TTCTGCCATG GAGGGGGCGA ACCGCTGGCG
ACCATCCTCG AGCGGGCCGA CAAGGCCCTC TACCAGGCCA AGGAGGAGGG CCGCGACCGG
GTCTGCGTCG CGCCCGCGTC ACATACCAGC ACGTAG
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| Protein sequence | MRARRHSAAR RHAPLRRTDN AAMHPIARPS LRPSSLRGQL TLWFGALTLA SVLGVGFYLG
RIATQDLARF AGDLLHTTAR SATDLLATNL RERALEIDLL RQLPLFTQGD LGGEAMRRAL
DQRKDAHSEY AWIGIASPEG RVLQATGGLL VGEKVDQRPW FRDATTRLFV GDVHDAVLLA
KRLPERRLDQ PLRFIDFAAP IVDANGTLRG VIGAHAHWYW VTETVEAVAV DRAAGPGIEV
LIADRSGNVL YPFRLAGQSR LPDRAAASAR YERLTWADGT EYLSSTVPLP SVAGADLGWR
IVVRQPADEA LAPARALRRQ LALLGLAAAL LCGLVAYRLA ARFSRPLELL ARAAHAIERR
EGVPRYPDGT DTLEVAQLNR SFQSMTASLL EREQELSRLN TSLENQVRER TLALHQANQE
LENLAVRDPL TGLYNRRRFD EALQAYTARC RELGHRFALM IVDADHFKRV NDTHGHQTGD
AVLRHLAGVI TGCVRSTDFI ARFGGEEFVV LMPEPRDREE GRFVAEKIRL AVGHTPFPGV
GHLTVSIGLA FCHGGGEPLA TILERADKAL YQAKEEGRDR VCVAPASHTS T
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