Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3970 |
Symbol | |
ID | 4669929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4399631 |
End bp | 4402009 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825159 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_972287 |
Protein GI | 120612609 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGGG AATTCCTGTT GAAAAACGAC ACGCAGGGGA GCAGCCACGC CCCCGCTCCT GCCGACGCCG CCGCGCCCCA CGCCCCGCCG GGCGCGCCAT CCACCACCCC CGCGTTCCAC GCCCATTCCG TCGAAGGCCA GCCGGAAAGC CGCTGGCAGA CGCTGCCCGA GCACCTGCAC GCCGTGGGCC GCATGGCCGG CGAATTCGCC GCCGTGTTCA ATGCGCAGGA GCTCGCCCAG GTCATGGGCT GGCTGCACGA CCTGGGCAAG TACACCCTGC CCTTCCAGGC CCGGCTGCGC GGCAGCCCCC TGCGCGTGGA CCATTCCACC TGGGGCGCGC GCATCGCCCA GCAGCGCCTG GGCGTGATGG GGCAATTGAT GGCGTATGGC ATCGCGGGCC ACCACGCGGG CCTGGCCAAC GGCCAGGGCG AAGGGGAGCG CACGGCACTG GCGGACCGGC TCACGGCCGC CGACCTGCCC GCGCTGCACC CCGCCTGGGA AAAAGACATC CCCCTGCCCG CCCGGCTGGC GCTCCCCGCC GGCCTCAAGC TCTACGGCCA GGACCGGCAG CAGGCCCTGG CGCGGCAGCC CTTCCAGATG GCCTTCCTGG CGCGCATGCT GTTTTCCTGC CTGGTGGACG CGGACTTCAT CGACACCGAG CGCTTCTACC TCCAGGCCAG GGGCGGACCG GACCACCGCT CCGCCGGCCC GGCCTGGCCG GCCCTGCCGG CATTGCGCGC CCAGCTCGAC ACCCACCTGC GCACGCTCAC GGCGCAATGC GATCCGGCCC GCGAGGTCAA CCGCCTGCGG GCGGACATCC TGCGCCAGGT CCGCGAGCGC GCCGAGTGCA CCCCGGGTCT CTTCTCGCTC ACGGTGCCCA CGGGCGGCGG CAAGACCCTG GCCTCGCTGG CCTTCGCGCT GGACCACGCC GTCCGCCACG GGCTGCGGCG CGTGATCTTC GTCATTCCGT TCACCAGCAT CGTCGAGCAG AACGCCGCCG TGTTCCGCAA GGCCCTCGGC CCGCTGGGCG ATACGGCCGT GCTGGAACAC CACAGCGCAT TCACCGAGCG CCAGCCGCCC CATGACGACC CGGAGAAATA CCAATCCGCC GAGAAGCTGC GCCTGGCCAT GGAGAACTGG GACGCGCCCA TCGTCGTCAC CACGGCCGTG CAGTTCTTCG AAAGCCTCTT CGCCGCGCGG CCCTCGCAGT GCCGCAAGCT GCACCACATC GCCGGCAGCG TGGTGGTGCT GGACGAGGCG CAGACCATGC CGCTCAAGCT GCTCAAGCCC TGCGTCGCCG CCATCGACGA ACTGGCGCGC AACTACCGCA CCAGCATCGT GCTCTGCACC GCCACGCAGC CCGTGCTGGA GGCACCCGCG TTCGACGGCG GGCTGACGGG CGTGCGCGAG CTGGCGCCCG AGCCCACGCG GCTCTTCCAG CAACTGGAGC GGGTGCGCGT GCGCCACGTG GGCACGCTGG ACGACGCGGC CCTGGCCGGC CACCTGCGGG CGCGCGAGCA GGTGCTGTGC ATCGTCAACA ACCGCCGCCA CGCGCGGGCC GTGTACGAAG CCATGGCCGA CCTGCCCGGC GCGCGGCACC TGACCACGCT GATGTGCGCC AGGCACCGCA GCGAGGTGCT GGACGAAGTG CGGCAGATGC TGGAGGCCGG CGAGCCCTGC CGCGTCGTCA GCACCAGCCT GATCGAGGCG GACGTGGATG TGGACTTCCC CACGGTGCTG CGCGCCGAGG CGGGCCTGGA TTCCATCGCC CAGGCGGCCG GCCGCTGCAA CCGCGAAGGC GGCAGGCCCA TCGACGCCAG CGAGGTGCTG GTGTTCTCCC CCGCCAACGA GGACTGGGCG CCGCCCCCCG AATTGAAGCA ATACGCCCAG GCGGCCCGCG AGGTGTTGCG CCAGTGCGCG GACGACCCGC TGTCGCCCGG GGCCATCGCC CGCTATTTCG CGCTGTTGTA CTGGCAAAAG GGCGGCGACC AGCTCGACGT GCCCGACCTC ATGGGCCTGC TCAAGACCCG CCGCCCGGAC AGCCTGCCGA TGGAAACCCT GGCGACCCGG TTCCGCATGA TCGACAGCGT GCAGATGCCG GTCATCGTGC CGTATGACGA CACGGCCCGG GAAACGCTGG AGCAGCTGCG GTTTGCCGAA GGCAGCGTGG GGCTGGCGCG CAAGCTGCAG CCTTATGTGG TGCAGTTGCC GAGGCAGGGA TTCGATGCGC TGTACCAGGC GGGGGCGATC GCGCCGGTGC GGCCGGATAG ATGGGGTGAG CAGTTCATGC AACTGGTGCA TCCGGACATC TACAGCCAGC GCTCCGGACT GCATTGGGAC GATCCCACCT TCATCCGCAG CGAACGCCTC CACTGGTGA
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Protein sequence | MEREFLLKND TQGSSHAPAP ADAAAPHAPP GAPSTTPAFH AHSVEGQPES RWQTLPEHLH AVGRMAGEFA AVFNAQELAQ VMGWLHDLGK YTLPFQARLR GSPLRVDHST WGARIAQQRL GVMGQLMAYG IAGHHAGLAN GQGEGERTAL ADRLTAADLP ALHPAWEKDI PLPARLALPA GLKLYGQDRQ QALARQPFQM AFLARMLFSC LVDADFIDTE RFYLQARGGP DHRSAGPAWP ALPALRAQLD THLRTLTAQC DPAREVNRLR ADILRQVRER AECTPGLFSL TVPTGGGKTL ASLAFALDHA VRHGLRRVIF VIPFTSIVEQ NAAVFRKALG PLGDTAVLEH HSAFTERQPP HDDPEKYQSA EKLRLAMENW DAPIVVTTAV QFFESLFAAR PSQCRKLHHI AGSVVVLDEA QTMPLKLLKP CVAAIDELAR NYRTSIVLCT ATQPVLEAPA FDGGLTGVRE LAPEPTRLFQ QLERVRVRHV GTLDDAALAG HLRAREQVLC IVNNRRHARA VYEAMADLPG ARHLTTLMCA RHRSEVLDEV RQMLEAGEPC RVVSTSLIEA DVDVDFPTVL RAEAGLDSIA QAAGRCNREG GRPIDASEVL VFSPANEDWA PPPELKQYAQ AAREVLRQCA DDPLSPGAIA RYFALLYWQK GGDQLDVPDL MGLLKTRRPD SLPMETLATR FRMIDSVQMP VIVPYDDTAR ETLEQLRFAE GSVGLARKLQ PYVVQLPRQG FDALYQAGAI APVRPDRWGE QFMQLVHPDI YSQRSGLHWD DPTFIRSERL HW
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