| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3946 |
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| Symbol | |
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| ID | 4667187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4371702 |
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| End bp | 4372403 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639825134 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_972263 |
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| Protein GI | 120612585 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.358275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAACA AGATTGCGGA TTCCGTCGCC CAGGCCCTGT CGGGCATCCA GGACGGCGCC
ACGGTGCTCG TCGGCGGCTT CGGCACGGCC GGCATTCCCG GCGAACTGAT CGACGGACTG
ATCGAGCAGG GCGCCCGTGA CCTCACGGTG GTCAACAACA ACGCCGGCAA CGGCGACACG
GGCCTGGCCG CGCTGCTCAA GACGGGCCGC GTGCGCAAGA TCATCTGCAG CTTCCCCCGG
CAGGTGGATA GCTGGGTGTT CGACGATCTG TACCGCTCCG GCAAGCTGGA GCTGGAACTG
GTGCCGCAGG GCAACCTCGC CGAGCGCCTG CGCGCGGCCG GGGCCGGCAT CGGCGCCTTT
TTCTGCCCGA CGGCCTACGG CACCGAGCTG GCGAAGGGCA AGGAAACGCG CGAGATCGGC
GGCAGGCATT ACGTGCTGGA GTACCCCATC CACGGCGACG TGGCCCTCGT CAAGGCCGAG
CGGGGCGACC GCTGGGGCAA CCTGACCTAC CGCATGTCCG CGCGCAATTT CGGCCCCGTG
ATGGCCACGG CCGCGAGGCA GACCATCGCC ACGGTGCACG AGATCGCGGA GCTGGGCGCG
CTGGACCCCG AGGCCATCGT GACCCCCGGC ATCTTCGTGA GCCGCATCGT GCGCATCGAG
CGCACCGCCA CCCAGGGCGC GGGCTTCAGG AAGCCTGCCT GA
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| Protein sequence | MINKIADSVA QALSGIQDGA TVLVGGFGTA GIPGELIDGL IEQGARDLTV VNNNAGNGDT
GLAALLKTGR VRKIICSFPR QVDSWVFDDL YRSGKLELEL VPQGNLAERL RAAGAGIGAF
FCPTAYGTEL AKGKETREIG GRHYVLEYPI HGDVALVKAE RGDRWGNLTY RMSARNFGPV
MATAARQTIA TVHEIAELGA LDPEAIVTPG IFVSRIVRIE RTATQGAGFR KPA
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