| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3936 |
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| Symbol | |
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| ID | 4666882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4362055 |
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| End bp | 4363866 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639825124 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_972253 |
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| Protein GI | 120612575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00859022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTTGAAG CGCTCCGGAC CATCGGGGAC CATGGCATCG TCGGCGATCT CGAAACGGTG
GCCCTGGTCG CACGCGACGG CGCGATCGAC TACCTGTGCT GGCCCACGCT CGACAGTCCC
ACGGTCTTCG CGGATCTGCT CGATCCGGGC CGGGGCGGTG CCTTCGAGAT CCAGCCCGAC
CTGGCAGCAC CCCGCAACCT CCAGCTCTAC GTGCCGGACA CCAACGTCCT GGTGACCCAC
TGGATGGGCA CGAACGGGAG CGCGGAGGTG GTCGACCTGA TGCCGCAGCC CGAAGCCCGC
CAGCGCACGG GCCACGGTGC GCGCGGTCTC ATCCGGCGCC TGACGGTGAC GAGCGGTACG
GTGGCATTCA CGGTGCGCTG CGCGCCGCGC TTCGATTACG CGCGCGAGAT ACCTGAGGTG
GTCGCCATCG ACGGCGGCGT GCGCTTCGGT GGCCGGGACG CGGCGCTCGA CTTCTTCGCG
TCCGCCCCGC TCGAAGTGGC GGAAGGCGGT GCCCAGGCCC GTTTCACCCT GTCCAGAGGC
GAGAGTGCGT GGTTCTTCCT CTGCGCCCCC GGGATGCCCT GTCCGGACGA GGCAGCGATC
CTGGCGCAGA TCGAAGCCAC CACGCACGCA TGGCGTTCCT GGCATGCCCT CTCGACCTAC
ACGGGGCGCT GGCGCGAACA GGTGCTGCGC TCGGCCCTGA CGCTGAAGCT GCTGACGTCG
GCCCGCCATG GCTCCATCGC GGCCGCGGCG ACGTTCTCGC TGCCGGAAGC CGAGGGCTGG
GAACGCAACT GGGACTACCG CGCCACCTGG ATCCGCGATG CCTCGTTCAC CGTCTATGCC
TTCCTGCGGC TCGGCTTCAC CGAGGAGGCC AACCGCTTCA ACCACTGGGT GGGCGAAAGG
GTCGTGGCAG CGGAGCGCGA CCATCCGTTG CGGATCATGT ATGCGCTCGA TGGATCGGCC
ACGGCGCGGG AGCAGGAACT GCCGCATCTG GCGGGCTATG CGGACAGCCG GCCCGTCCGC
ATCGGCAACG CGGCGCAGGA GCAGATCCAG CTCGACATCT TCGGCGAGCT GCTCGACAGC
GCCTACCTCT CCAACAAGTA CGGGGACCCC ATCCATTACC AGGGCTGGCA GCACGTCCGC
GCCATCGTCG ACCACGTGAT CGAGCACTGG AACGAGCCGG ACGCGGGCAT CTGGGAGATG
CGCTCGGCAC CGCGCCACTT CCTGCATTCC CGGGTGATGT GCTGGGTTGC GCTCGACCGC
GCCATCCGCC TGGCCAAGAA ACGCTCCCTT CCCGCGCCGC TGGTCGCCTG GGCGCAGGCC
CGCGATGAGA TCGTCGCCGA CATATGGACG AACTTCCGCC ACCCCGAGCA CGGCTATTTC
GTGCAGGAAC GCGGCGGCAA GGAACTCGAC GCGGCACTGC TGATGATGCC GCTCGTGCGC
TTCGTCTCTT CGACCGACCC CGTCTGGCTC CGGACGCTGG ACGCCATCGG CGAGCAGCTG
TGCGACGACG GGCTGGTCTA TCGCTACAAC GTCGATGACG GCCTGGGTGG CGAGGAGGGC
GCGTTCACCA CGTGCACGTT CTGGTACACG GAGTGCCTGG CCCGCGCCGG GCGTCTCGAT
GAGGCACGGA TCCACATGGC CAAGGGCCTG GCCTATGCCA ACCATCTGGG GCTGTTCGCC
GAGGAGATCG ACGTTCGCGG CCTGCCGCTC GGCAACTTTC CCCAGGCCCT CAGCCACCTT
GCGTTCATCA GCGCTGCCTA CTTCCTCGAT CGCCGCCTCG ATCCGGCCTA TCGGCCGGTC
TGGCAGCCTT AG
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| Protein sequence | MVEALRTIGD HGIVGDLETV ALVARDGAID YLCWPTLDSP TVFADLLDPG RGGAFEIQPD
LAAPRNLQLY VPDTNVLVTH WMGTNGSAEV VDLMPQPEAR QRTGHGARGL IRRLTVTSGT
VAFTVRCAPR FDYAREIPEV VAIDGGVRFG GRDAALDFFA SAPLEVAEGG AQARFTLSRG
ESAWFFLCAP GMPCPDEAAI LAQIEATTHA WRSWHALSTY TGRWREQVLR SALTLKLLTS
ARHGSIAAAA TFSLPEAEGW ERNWDYRATW IRDASFTVYA FLRLGFTEEA NRFNHWVGER
VVAAERDHPL RIMYALDGSA TAREQELPHL AGYADSRPVR IGNAAQEQIQ LDIFGELLDS
AYLSNKYGDP IHYQGWQHVR AIVDHVIEHW NEPDAGIWEM RSAPRHFLHS RVMCWVALDR
AIRLAKKRSL PAPLVAWAQA RDEIVADIWT NFRHPEHGYF VQERGGKELD AALLMMPLVR
FVSSTDPVWL RTLDAIGEQL CDDGLVYRYN VDDGLGGEEG AFTTCTFWYT ECLARAGRLD
EARIHMAKGL AYANHLGLFA EEIDVRGLPL GNFPQALSHL AFISAAYFLD RRLDPAYRPV
WQP
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