Gene Aave_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3931 
Symbol 
ID4667711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4356562 
End bp4357236 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID639825119 
Productisochorismatase hydrolase 
Protein accessionYP_972248 
Protein GI120612570 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0122322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC CCACCACCAG CGCCCAGAGC ATCCCCGCCG GGGGCGTGCA GGGCGACATC 
TCCGCCTACG CCCGCCAGGG CTTCGGCACG CCGCTGCCGC TCAAGGCGCC CTTCGGCCTG
CTCATCATCG ACTTCGTGAA CGGCTTCGCC GACCCGGCCG TGTTCGGCGG CGGCAACATT
CCCGCGGCGA TCGAGCGCAC GCGCGGCCTG CTGGCCCATG CGCGCGAACG CGGCTGGCCC
GTGGCGCACA GCCGCATCGT GTTCTCGGAC GACGACGCGG ACAGCAACAT CTTCTGCCTG
AAGGTGCCCG GCATGCTGAC GCTGAAGGAA GACAGCCCGG CCAGCGCCAT CGTGCCCGAG
CTGGCCCCCG CCCCGGGCGA ATACGTGGTG CGCAAGAGCA CGCCCTCGGC CTTCTTCGGC
ACCATGCTCG CGCCCTGGCT GGCCCAGCGC GGCGTGCAGA CGCTGCTGGT GGCCGGCTGC
GTGACCAGCG GCTGCGTGCG CGCCAGCGTG GTCGATGCCA TGCAGTCGGG CTTCCGTCCC
CTGGTGGTGG CCGACTGCTG CGGCGACCGC GCCCTTGGCC CCCACGAGGC CAACCTGTTC
GACATGGCGC AGAAGTACGC GGCCGTGATG CCCCTCGACC AGGCCCTGGC CGATACCGGC
GCGCTCGCGC GTTGA
 
Protein sequence
MTNPTTSAQS IPAGGVQGDI SAYARQGFGT PLPLKAPFGL LIIDFVNGFA DPAVFGGGNI 
PAAIERTRGL LAHARERGWP VAHSRIVFSD DDADSNIFCL KVPGMLTLKE DSPASAIVPE
LAPAPGEYVV RKSTPSAFFG TMLAPWLAQR GVQTLLVAGC VTSGCVRASV VDAMQSGFRP
LVVADCCGDR ALGPHEANLF DMAQKYAAVM PLDQALADTG ALAR