Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3931 |
Symbol | |
ID | 4667711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4356562 |
End bp | 4357236 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825119 |
Product | isochorismatase hydrolase |
Protein accession | YP_972248 |
Protein GI | 120612570 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0122322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC CCACCACCAG CGCCCAGAGC ATCCCCGCCG GGGGCGTGCA GGGCGACATC TCCGCCTACG CCCGCCAGGG CTTCGGCACG CCGCTGCCGC TCAAGGCGCC CTTCGGCCTG CTCATCATCG ACTTCGTGAA CGGCTTCGCC GACCCGGCCG TGTTCGGCGG CGGCAACATT CCCGCGGCGA TCGAGCGCAC GCGCGGCCTG CTGGCCCATG CGCGCGAACG CGGCTGGCCC GTGGCGCACA GCCGCATCGT GTTCTCGGAC GACGACGCGG ACAGCAACAT CTTCTGCCTG AAGGTGCCCG GCATGCTGAC GCTGAAGGAA GACAGCCCGG CCAGCGCCAT CGTGCCCGAG CTGGCCCCCG CCCCGGGCGA ATACGTGGTG CGCAAGAGCA CGCCCTCGGC CTTCTTCGGC ACCATGCTCG CGCCCTGGCT GGCCCAGCGC GGCGTGCAGA CGCTGCTGGT GGCCGGCTGC GTGACCAGCG GCTGCGTGCG CGCCAGCGTG GTCGATGCCA TGCAGTCGGG CTTCCGTCCC CTGGTGGTGG CCGACTGCTG CGGCGACCGC GCCCTTGGCC CCCACGAGGC CAACCTGTTC GACATGGCGC AGAAGTACGC GGCCGTGATG CCCCTCGACC AGGCCCTGGC CGATACCGGC GCGCTCGCGC GTTGA
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Protein sequence | MTNPTTSAQS IPAGGVQGDI SAYARQGFGT PLPLKAPFGL LIIDFVNGFA DPAVFGGGNI PAAIERTRGL LAHARERGWP VAHSRIVFSD DDADSNIFCL KVPGMLTLKE DSPASAIVPE LAPAPGEYVV RKSTPSAFFG TMLAPWLAQR GVQTLLVAGC VTSGCVRASV VDAMQSGFRP LVVADCCGDR ALGPHEANLF DMAQKYAAVM PLDQALADTG ALAR
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