| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3917 |
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| Symbol | |
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| ID | 4666540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4340069 |
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| End bp | 4342261 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639825105 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_972234 |
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| Protein GI | 120612556 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.121009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACC TCCGTCCCGG CGCAGCGTTT CAGCGCGCCG CCGCCCTGGC TTTGCCGCGC
CGTCCTGCCC GCTCCACCCT CCCTGCGCTC CGCTTGGGCC GCCACGCCCT GACCCCGCTG
GCGCTCTGCC TGTCGCAGGC CGCGTTCGCC CAGTCCGGCA CCGCTGTGGA CGGCACCGCG
CAGTCTCCCG CGCAATTGCA GGAAGTGCGC ATCAACGCCG GCACCGAGAA GGACGTGGGC
TTCGCTCCGA CCGAAGCCCA GACGGCCGGC AAGATGCCGA TGCGCCGGCT GGAGACGCCG
CAGTCGGTCG GCGTGGTGAC GCGCGAGCAG ATGGAGTCGC GCCAGATCAC CAACCTGCAG
CAGGCGCTGC AGACCGTGGC GGGCGTGAGC CCCGTGAACT TCGGCCGCCG CGGCGTGGAC
GACCTCAACA TCCGCGGCTT CCGCTCCACC GAATCCGTGC TGATCGACGG GCTGGTGCAG
AGCGTCGGCA TGTGGACACG CCTGAACCCC TACGGCTACG AGCGTTTCGA GGTGCTCAAG
GGTGCGGCAT CGGTGCTCTA CGGCCAGGTG CAGCCCGGCG GCATCGTCAA CGCGGTGAGC
AAGCGGCCCA GGCGCGAGGC GCTCACCGAG GTGGGCGTGG AGGTGGGCAG CTTCGGACAG
CGCACGCTGC AGGCAGACCT GAACCGGCCG CTGAACGAAT CCGGCAAGGC GGCCTTCCGC
ATCAACGCGC AGGTGGCCAA CAGCGACGAC CCGACCGATT TCATCTACCG CCGCGACCGC
TGGATCGCGC CCTCGCTGTC GCTGGACTTA GGGCCGCAGA CCGACCTGGT GGTGTTCGCC
ACCTACAACC AGAGCCAGTG GATGCGCCAG CAGGGCGTCA CGCCCTACGG CACGGTGCTG
CCCAACCGCA ACGGCCCGGT GCGGCGCACG CTCTACACGG GCGACCCCAG CTTCGGCGGA
TACGACATCG AGACCAAGTC GCTGGGCTAC GCGCTGGAGC ACCGCTTCTC GCCCGCGCTC
ACGCTGCGCC AGAACGTGCG CTACGAGACC GAGGGCGGCA CCGGCAACCT CGTCGCCAAC
TCCACGCTGC AGTCGAACCA GCGCCTGCAG AACCGCACCG CCACGCGCCA GTACATGGAC
GACGAGATGC TGGCCACCGA CACCTCGGTG CTGGCGAAGT TCGCGGCCCT CGGCGTGCAG
CACCAGCTGG TGGCCGGGCT GGACGCGCGC ACCGGCAAGA GCTGGCTGGG CCGCCGCACC
TGCAGCATCG CGCCGATGGA CCTGTTCAAC CCGGTGTACG GCGTGGCGGC GCGCTGCCCC
GCGGGGCTGA CGATCGACGC GCCGGAGCGG CTCACCGTGG CGGGTCTCTA CGCGCAGGAC
CAGATCAGGC TCACGCCGCA GTGGACCGTC CTGGCGGGCC TGCGCCGCGA CTGGTCCACC
AACACCATCG ATGACCGCAT CGCGCGGGAG AAGACACGGC AGAAGGACTC CGCCACCACG
CTGTCCGCCG GCGTGGTGTA CGAGTTCGTG CCCGGCTGGG CCGCCTACGC GAGCTACGGC
GAATCGTTCC TGCCCGTGTC GGGCACCAGC TTCTCGGGCG CGCCGTTCGT TCCCGAAACC
GGCAAGCAGT GGGAAACCGG CCTGAAGTAC GAAGCTCCCG ACCGCAGCGT CACCGGTTCG
CTGGCCCTGT TCGACCTGAA GCGCAGCAAC GTCACCACCG CCGACCCGGT GAACGCCACG
TTCCAGGTGC AGACCGGAAC GCAGCGCGCG CGCGGGCTGG AGCTGGAAGT GGGCGCCGAG
CTGCAGCGCC ACTGGAAGCT CACGGGCGCC TACACCTACA CCGACTCGGA GGTCACGCGC
GACAACAATG CCGCCATCGT CGGCAAGCCG CTCAACCTGA CGCCGCGCAG CACGTTCGCC
CTGTGGGCCA CCTACCAGCT GCCGCAGATG CCGCAGCTCA CGCTGGGCGC GGGCGCCCGC
CACGTGACCC GGCAGGTCGG CTCCTATCCG TTCTCCCTGC CCGCCTACAC GGTGGTGGAT
TTGTCCGTCG GCTACACCGG GCCCAGCTAC CGCATCACGG CCGGCGTGAA GAACGTGTTC
GACCGGGCCT ACTACGACGG CGCGATCAAC GCCAACGTCG TCTCGCCCTC GCTGCCGCGC
AACTTCAGCG TAGGCCTGAC GTACTTCTTC TGA
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| Protein sequence | MIHLRPGAAF QRAAALALPR RPARSTLPAL RLGRHALTPL ALCLSQAAFA QSGTAVDGTA
QSPAQLQEVR INAGTEKDVG FAPTEAQTAG KMPMRRLETP QSVGVVTREQ MESRQITNLQ
QALQTVAGVS PVNFGRRGVD DLNIRGFRST ESVLIDGLVQ SVGMWTRLNP YGYERFEVLK
GAASVLYGQV QPGGIVNAVS KRPRREALTE VGVEVGSFGQ RTLQADLNRP LNESGKAAFR
INAQVANSDD PTDFIYRRDR WIAPSLSLDL GPQTDLVVFA TYNQSQWMRQ QGVTPYGTVL
PNRNGPVRRT LYTGDPSFGG YDIETKSLGY ALEHRFSPAL TLRQNVRYET EGGTGNLVAN
STLQSNQRLQ NRTATRQYMD DEMLATDTSV LAKFAALGVQ HQLVAGLDAR TGKSWLGRRT
CSIAPMDLFN PVYGVAARCP AGLTIDAPER LTVAGLYAQD QIRLTPQWTV LAGLRRDWST
NTIDDRIARE KTRQKDSATT LSAGVVYEFV PGWAAYASYG ESFLPVSGTS FSGAPFVPET
GKQWETGLKY EAPDRSVTGS LALFDLKRSN VTTADPVNAT FQVQTGTQRA RGLELEVGAE
LQRHWKLTGA YTYTDSEVTR DNNAAIVGKP LNLTPRSTFA LWATYQLPQM PQLTLGAGAR
HVTRQVGSYP FSLPAYTVVD LSVGYTGPSY RITAGVKNVF DRAYYDGAIN ANVVSPSLPR
NFSVGLTYFF
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