Gene Aave_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3895 
Symbol 
ID4665526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4319359 
End bp4320387 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content71% 
IMG OID639825083 
Producthypothetical protein 
Protein accessionYP_972212 
Protein GI120612534 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT CAGACAAGTC GCCTCCCATC TCCCTGGCCC GCCGCCGCAT CCTCGCTTCC 
GGAGCCGCCC TGCTGGGCTG CGGATGGGCG GTGGCAGCGC CGCCGCCGGC ACAGGATGCC
GCGTGGCCGT CCAGGCCGTT GCGCATCATC GTGGGATTCC CCCCGGGCTC CTCGCCAGAC
CTGACGGCAC GTACCTTCGC CGACCCGCTC GCCCATGCGC TGGGCCAGCC GGTGGTCGTG
GAGAACAAGG TCGGCGCCAG CGGCAACATC GGCGCGGATG CCGTGGCCAA GGCGGCGGAT
GGCCACACCA TCGGGCTGTT CATCAACGTC AACCTGACGA TCGCCAAGCT GATCAACCCC
GCGTTGCCCT TCGATCCGCA CCGGGACCTC GCTCCGCTCA GCCTCGTGGG CATCTCGCCG
CTGGTGCTCG CCGCGCCGGC TGCGCAGGCC GGTGTGCCGG CCCATGCGGA TGCGCGCACC
TTCCTGGAGG CTGCCCGCCA GGCGGGTGAC CGCTGGAGCT ACGGAACGCC CGGCGTCGGC
ACCATGGGCC ATATCGGGAC CGAACTGCTC AAGGCCCGCA CGGGCATCGC GCCGGTGCAT
GTCCCCTATC CGGGCTATCC GCAGGTGGCG ATGGGCATGC TGGGCGGGCA ACTGCAGATG
GCCCTGCTGC CCCCCGCGCT GGCCGTGGCA CAGCAACGCA GCGGCAAGCT GCAGCTGCTG
GGCGTGACCT CGACCGGCCG CAGTTCGCTC GTGCCGGGCG TCCCGAGCCT CGCCGAGGCC
GGCGTGAAGG ATTTCCAGTT GGAGATCTGG AATGCCTTCG CTGCACCCGC GTCGATGCCG
GCTGCCCACC GGGCGCGTCT TTCCACAGTG ATCGCCGAGA TCGCCCGGAC TCCGGAAGTG
CGCAACGCGC TGTTCCAGCA GGGCTGGCAG GTGGCCGGCA CCTCCGCCGA AGGCCTGGCC
CGGCGCATCG AGGCGGATAC GTCCCAGATG GAGCAGGTGA TCCGCGCGAA GAACATCCGG
GTGGAGTAG
 
Protein sequence
MQRSDKSPPI SLARRRILAS GAALLGCGWA VAAPPPAQDA AWPSRPLRII VGFPPGSSPD 
LTARTFADPL AHALGQPVVV ENKVGASGNI GADAVAKAAD GHTIGLFINV NLTIAKLINP
ALPFDPHRDL APLSLVGISP LVLAAPAAQA GVPAHADART FLEAARQAGD RWSYGTPGVG
TMGHIGTELL KARTGIAPVH VPYPGYPQVA MGMLGGQLQM ALLPPALAVA QQRSGKLQLL
GVTSTGRSSL VPGVPSLAEA GVKDFQLEIW NAFAAPASMP AAHRARLSTV IAEIARTPEV
RNALFQQGWQ VAGTSAEGLA RRIEADTSQM EQVIRAKNIR VE