| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3884 |
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| Symbol | |
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| ID | 4665223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4307694 |
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| End bp | 4309259 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825073 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_972202 |
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| Protein GI | 120612524 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT CGCCGCCCGT CCTCTCCAGC GCTCCTTCGA GCACCCCTGC AAACCCCTCA
TCCGCATCCA CCCGCGCCCC GACGCGCGAC CTGACGCAAG GCCCGATCGG CCGCACCCTG
CTGGTCTTCG CGCTGCCCAT CCTGGCAGGC AACGTGCTGC AGTCGCTGAA CGGCTCGGTC
AATGCGGTGT GGGTGGGCCG CTACCTGGGC GAGGCCGCGC TCACTGCCAC GGCCAATGCC
AACAACATCC TGTTCCTCTT GATCGGCGCG GTGTTCGGCG TGGGCATGGC GGCCACCATC
CTCGTGGCGC AGGCCATGGG GGCGCGCGAT CCGCAGCAGG CACGCCGTGT GATCGGCACC
AGCGCCACCT TCTTCGGCGG CACGGCCGTG CTGATCGCGG CTGCCGGCCC GCCGCTCTCG
CGCGAGATCC TGGGCTGGAT GGGCACGCCC GCCACCGCCC TGCCGCTGGC AGAGGCCTAT
CTGCGCACGC TGTTCCTGGC GGTGCCGCTG CTCTACCTGT TCGCCTTCAT CTCGGCCGTG
CTGCGCGGCG CGGGCGACAC GCGCACGCCG TTCCTCTTCC TGCTGCTGGT GGTGGCGCTG
GACACGGCGC TGAATCCATT GCTCATCTTC GGCTGGGGCT CGGTGCCGCG CATGGGCATC
GCCGGCTCTG CCATGGCCAC CTTGGTGGCC AACGCGATCA GCTTCGCCGC GCTGCTGGCG
TGGCTGCGCT GGCGCCGGCA CCCGCTCTGG ATCGGCCGGG CCGACTGGCG GCTCTTTGTG
CCCGACGGGC CCATCCTGCG TGCGCTGGTC GTCAAGGGCC TGCCGATGGG CGCGCAGATG
GTGATGATCT CCACCGCCAT GCTGATGCTG ATGGGCCTCG TCAACGCGCA GGGCGTGGTT
ACTGCATCGG CCTACGGCGC GGCGCTGCAG CTCTGGACCT ACGTGCAGAT GCCGGCCATG
GCCATCGGGG CGGCCTGCTC GTCCATGGCG GCGCAGAACG TGGGCGCCGG CCGGTGGGAG
CGGGTGGACG GCGTGGCCCG CGGCGGCACG CTCTTCAACT TCGTGCTGAC CGGCGCGATC
ATCGTGCCGC TGGTGCTGCT GGACCGCACG GCGTTGTCGC TCTTCCTGCC CGCCGGCAGC
GCGTCGCTGG AGGCGGCGCG CCATTTGAAT CACATCGCCG TGGGCTCGTT CCTGTTCTTC
GGCGTCACCT TCGTGCTCTC GGGCGTGGTG CGTTCCACCG GCGCGGTGAT GCCACCACTC
ATCATCCTGG GCCTGGCGCT CTGGAGTATC CGCCTGCCGG TCGCCTATGG CCTGCAGCCC
TGGCTGGGCA CCGATGCGAT CTGGTGGAGC TTTCCGGCCA GCGCGCTTTG CGCCATGCTG
ATGTCGATGG CCTACTACCG CTGGGGCCGC TGGCGCCAGG CACGCATGCT CACGCCTGCC
GAGCCGGTGG TGGCGACCCC GGCCGAAGTG GGTGGCCTGC CGCCTGCGCC GGTCTGCGCG
CAGGCAGGCG CAGCGCACGG GTCACCCGGC CGGCAGGCGG TGGTCGCGCA CTCGCGCACC
ACATGA
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| Protein sequence | MPASPPVLSS APSSTPANPS SASTRAPTRD LTQGPIGRTL LVFALPILAG NVLQSLNGSV
NAVWVGRYLG EAALTATANA NNILFLLIGA VFGVGMAATI LVAQAMGARD PQQARRVIGT
SATFFGGTAV LIAAAGPPLS REILGWMGTP ATALPLAEAY LRTLFLAVPL LYLFAFISAV
LRGAGDTRTP FLFLLLVVAL DTALNPLLIF GWGSVPRMGI AGSAMATLVA NAISFAALLA
WLRWRRHPLW IGRADWRLFV PDGPILRALV VKGLPMGAQM VMISTAMLML MGLVNAQGVV
TASAYGAALQ LWTYVQMPAM AIGAACSSMA AQNVGAGRWE RVDGVARGGT LFNFVLTGAI
IVPLVLLDRT ALSLFLPAGS ASLEAARHLN HIAVGSFLFF GVTFVLSGVV RSTGAVMPPL
IILGLALWSI RLPVAYGLQP WLGTDAIWWS FPASALCAML MSMAYYRWGR WRQARMLTPA
EPVVATPAEV GGLPPAPVCA QAGAAHGSPG RQAVVAHSRT T
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