Gene Aave_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3818 
Symbol 
ID4665464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4239718 
End bp4240467 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID639825008 
ProductABC transporter-related protein 
Protein accessionYP_972137 
Protein GI120612459 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.356438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC ACGTTCCATT GCTCGAGGCG CGCGGGCTCG ACGTCGCGTT CGGTGGCATC 
CATGCGGTGC GGCAGGTGGA CATGCGCATA GGTCCGGCAG AGCTGATCTG CATCATCGGT
CCGAACGGCG CCGGCAAAAG CACGCTGCTG GGGGTTTTGT CCGGCGCGGT CCGTACCCAT
GCCGGCAGCC TGGCGATCTC CGGGCGGGAC ATGACGCGGC AGCTCCCGCA CGAATTCGCG
CGCCGGGGAG TGATCCGCAA ATTCCAGGGC ACGAATGTCT TCCAGTGGCT GAGCGTGCGC
GAGAACCTGG TCGTGGCGGC GCAGGGCGTC GAAGGCGACC GTGCGCGGTC CGCCCCGGAT
TGCGACGAAA TTCTCGCCCT CACCGGGCTG CAGCACCGTG CCGATGAAAC GGCGGAGTGC
CTGCCGCACG GCGAACGCCA GTGGCTGGAG ATCGGCATGG CACTCATGTG CCGGCCCCGC
CTGCTGTTGC TGGACGAACC CGCCGCAGGC ATGAGCGTCG ATGGGACCCG CCGCATGGTC
GGAATGCTGC GCCAGCTTTC GCAGGAGATG TCGGTCGTGG TCATCGAGCA CGACATCGGC
TTCGTGCGCG AACTGGCGTG CCGGACTCTG GTGATGCACC AGGGCGCCGT GATCCGCCAG
GGCGCCTTCG CGGAAATCGA ACGGGACGAA CACATACGGC ACATCTATCT GGGCCGGAGC
AAGGAGGCGC GCCATGCTGG ACGTGCGTGA
 
Protein sequence
MNDHVPLLEA RGLDVAFGGI HAVRQVDMRI GPAELICIIG PNGAGKSTLL GVLSGAVRTH 
AGSLAISGRD MTRQLPHEFA RRGVIRKFQG TNVFQWLSVR ENLVVAAQGV EGDRARSAPD
CDEILALTGL QHRADETAEC LPHGERQWLE IGMALMCRPR LLLLDEPAAG MSVDGTRRMV
GMLRQLSQEM SVVVIEHDIG FVRELACRTL VMHQGAVIRQ GAFAEIERDE HIRHIYLGRS
KEARHAGRA