Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3818 |
Symbol | |
ID | 4665464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4239718 |
End bp | 4240467 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825008 |
Product | ABC transporter-related protein |
Protein accession | YP_972137 |
Protein GI | 120612459 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.356438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC ACGTTCCATT GCTCGAGGCG CGCGGGCTCG ACGTCGCGTT CGGTGGCATC CATGCGGTGC GGCAGGTGGA CATGCGCATA GGTCCGGCAG AGCTGATCTG CATCATCGGT CCGAACGGCG CCGGCAAAAG CACGCTGCTG GGGGTTTTGT CCGGCGCGGT CCGTACCCAT GCCGGCAGCC TGGCGATCTC CGGGCGGGAC ATGACGCGGC AGCTCCCGCA CGAATTCGCG CGCCGGGGAG TGATCCGCAA ATTCCAGGGC ACGAATGTCT TCCAGTGGCT GAGCGTGCGC GAGAACCTGG TCGTGGCGGC GCAGGGCGTC GAAGGCGACC GTGCGCGGTC CGCCCCGGAT TGCGACGAAA TTCTCGCCCT CACCGGGCTG CAGCACCGTG CCGATGAAAC GGCGGAGTGC CTGCCGCACG GCGAACGCCA GTGGCTGGAG ATCGGCATGG CACTCATGTG CCGGCCCCGC CTGCTGTTGC TGGACGAACC CGCCGCAGGC ATGAGCGTCG ATGGGACCCG CCGCATGGTC GGAATGCTGC GCCAGCTTTC GCAGGAGATG TCGGTCGTGG TCATCGAGCA CGACATCGGC TTCGTGCGCG AACTGGCGTG CCGGACTCTG GTGATGCACC AGGGCGCCGT GATCCGCCAG GGCGCCTTCG CGGAAATCGA ACGGGACGAA CACATACGGC ACATCTATCT GGGCCGGAGC AAGGAGGCGC GCCATGCTGG ACGTGCGTGA
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Protein sequence | MNDHVPLLEA RGLDVAFGGI HAVRQVDMRI GPAELICIIG PNGAGKSTLL GVLSGAVRTH AGSLAISGRD MTRQLPHEFA RRGVIRKFQG TNVFQWLSVR ENLVVAAQGV EGDRARSAPD CDEILALTGL QHRADETAEC LPHGERQWLE IGMALMCRPR LLLLDEPAAG MSVDGTRRMV GMLRQLSQEM SVVVIEHDIG FVRELACRTL VMHQGAVIRQ GAFAEIERDE HIRHIYLGRS KEARHAGRA
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