Gene Aave_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3808 
Symbol 
ID4666468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4229915 
End bp4230934 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID639824998 
Product3-oxoacyl-(acyl-carrier-protein)-like protein 
Protein accessionYP_972127 
Protein GI120612449 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC TCTGGCGTTG CACCCTCAAG CGCAGCACCC TCCATCTTCC GGCGACCCGC 
AGCCGGTTCC ACGGCCTGCG GGCGCAGCAG CGGTCTCCCG CCACCGCCTA CCTCCATGAA
CCCGGCTTCG ACTACAACCT GCCTTTCGGG AGCTGGGACG ATCCACCGCC CCTGCAACTC
GAGGCCATGC GCACGACGAC GCCCGTGCTG CTGCACACGG CCGATCCCGA GGCCACCGCG
TCGGATCTCG CGGTCGCGGC AGCACGGGCT CTGTTCGAAG GCCGCAGCGA TACGGAGCGC
GAGCGCATCG GCATCATCAT CTACTGCCAT GCGTCCGCGA ACGAGAACGT GGCGGAAGGC
ATCGCATGCC GCATCCAGTA CGAACTGGGC GCGACCACCT CGATGGTGTT CAGTCTTTCG
CAGAATCTCT GCAGCGGCCT CGTCGCCCTG CGGCTCGCCT GCGCGCTCCT GCAGGACGAG
CCGAAGGGCC GCAGCGCCGT CATCGTGGCA GCGGAGAAAT GGATCCACCC TTTCGTGCGC
AGCTTCGGCA AGACCGCGGT CTTCGAGGAC GGTTCGGCGG CGCTGCAGCT CGAGGCGGCC
GGGCAGCCCG GTTGGGAGCT CGGCAGTGTC CACCATGCCG ATCTCGTCGG TACGCCGACG
CCGTTCGAGG CGACGCCATC GGAGCTGCGG CAGACGCTGC TGCAGCAAGG TGTGCGGACG
CTGCGGGAGA TGCTCGATAT CGCGGCCGTC CGCCCGCAAG ACCTGGACTT CGCTCTGATG
CCGCACATCG ACGGCCAGCT CTGCGACCAG ATACTGCAAG GCGCGGGCAT GGAACATGTG
TACCGGCCGC GGGACATGCG GCGCCAGGGC CACCTGGCGG CCGCCGAAAG CCTCGCCAAC
CTGCACAGCG CGACATGGGA TGGAGCGCTG ACGGGCGAGC GCAGGCTCGG CGTGCTCTGG
AGCACGGGGC TGCAGGGCGA ATCGGCCTGC TGCCTCGTGC GCACGGGAGG CAGGCCATGA
 
Protein sequence
MQDLWRCTLK RSTLHLPATR SRFHGLRAQQ RSPATAYLHE PGFDYNLPFG SWDDPPPLQL 
EAMRTTTPVL LHTADPEATA SDLAVAAARA LFEGRSDTER ERIGIIIYCH ASANENVAEG
IACRIQYELG ATTSMVFSLS QNLCSGLVAL RLACALLQDE PKGRSAVIVA AEKWIHPFVR
SFGKTAVFED GSAALQLEAA GQPGWELGSV HHADLVGTPT PFEATPSELR QTLLQQGVRT
LREMLDIAAV RPQDLDFALM PHIDGQLCDQ ILQGAGMEHV YRPRDMRRQG HLAAAESLAN
LHSATWDGAL TGERRLGVLW STGLQGESAC CLVRTGGRP