| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3751 |
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| Symbol | |
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| ID | 4669414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4162182 |
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| End bp | 4167215 |
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| Gene Length | 5034 bp |
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| Protein Length | 1677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824942 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_972072 |
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| Protein GI | 120612394 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.457542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA AACCCGCGGC CCGGCAGGGC GACTTGACAA AAAAAGGCGG CCCGATCGTC
CAGGGCTCGG CGACGGTGCT GATCGGCTCG GCGGGAGGCG TGGCGTGCTC GGTGTGCCCC
GGGGGCATGG CGGTGGGCAA CCCGGTGAAC CCGGCGCTGG GCGCGAAGGT GCTCACGGGG
GGCGATGAAC TGGACTTCGC GCTGCCCGGG CCATTGCCGC TGGCGTGGCA GCGGGTGTAC
AGCAGCTATG TGAACGCGGA GCATGGCGCG GCGTGCGGGC TGCTGGGGTA TGGGTGGAAG
CTGCCGCTGG AACTGCGGTT GGTACTGCAG GATGAGCGCG CGGTGCTCTT CGATGCATCC
GGACGGGCGA TCACGTTCGA GGAGCCCTTG CAGCCGGGGC AGGCGCTGCA CAGCAGCAGC
GAGGACCTGT GGCTGTTGCG GGGTGGGGGC ATGGCTGGCT CCACGGCCCC ATCCTCCACG
CCTGCCGAAC TGCTGCCCTG GGCGCAGCAA CCGCGCTGGT CGCACGTGCC GGCGGTGCTG
CGCACAGACC CGGGCTGCGT GATCGCCGTG CCGGGTGCGG GCGGTGCAGG TGCGCCGGCA
TGGGTATTCC TGCCGACGGG CGTATCGGGC GACCGTGTCC TGCATGCCGT GATCGACCGC
TTCGGCCGCA GCCAGCGCTA CCAGTGGGGC ACGGAAGGCG AGCAGCAGGG CCGCGTCGCA
GGCATCACCG ATGGCAGCGG ACGCCGCTAT GCGCTGCGTT ACGAGCGCAT CGCACCGGAT
GCCACGGCAG CCCGCAAGCC CGGCAAGCCG GATGAGGGCG GACAGGCACG CCATCCGCTG
CTCGGCCCCG ACGACGGTGT AAGGCTGGTG GGCGTGGACT GCACCTTCAA CCCGCTCGAC
CCTGCAGTGA TACCCGGCGC GGCCCCGCGC CCGCAACCCC TGGTGGGCTA CCGCTACGAC
AGCGCAGGCA ACCTGGCCGA GGTGCTGGGC GCGGACGGCA CCGTGCTGCG CCGCTTCGGC
TACGACGCAT TGCACCGGAT GACGGAGCAC CAGGTGCGCC AGGGCCCCAG GCACCGCTAC
GTCTATGAGG ACCAGACCGC GCAGGGCCGT CGCCAGGGGC TGGCGGCCCG CCCGGGTGCA
CGCGTGGCCG AGCAGCACAA CGAAGAGGGG CTGTCGTACT TCTTCGAGTA CAGTCAGGCA
CCCGCGCAAC CTGCGCCATC CACGCACACC ACGCAGGCGA CCCAGGGCCC GGAGGATGAC
CAGGATGGCC CGACTCCGGC CACCGCGTCT TTGCCCAGCA ATCGTCAAAG CAGCACGTTG
GTGCGCGACA GCCTGGGCCG TACCACGGCC TACCACTTCG AAGGCGAAGG CGGCCTCAAG
CGCCTGGTGC GCCTCGTGGC CCCGGACGGG GCCGAGCAAG GATTCCGATA CGACAGCGCC
GGCCGGCGGC TCTCGGCCAC CGATGCGCTG GGCCGCACCA CGTGGTGGCG CTACGACGGC
GCAGGCCGGC TGCTGGGCGT GCAAGGCCCG GACGGGCGCA GCACGCAGCA GCACTGGGGC
GCGGCGGGCA GTGCGCAGGA CGGCTTGCTG CTGGCCAGCC AGGACGCGGC GGGGCTGCGC
ACGGACTTCC GCTACGACGA CTGGGGCCGG CTATTGGAGG TGGCGATGGC ACCAGCCGGG
AGCGGGGACG GAGCCACGAA CACCCAGGTC CTCACCACCC GCTTCGAATA CGAACAACCC
CGGCAGGATG CCGCTACCGG TACCACGGCA GGCACCACAG TCTTCCCTCC GCACTCACTC
GCCTGGTGCG ACCAGCCCGT GGCGATGATC GACGCGCAGG GCGGGCGCAG CCTCTACGCC
TACAACGCCT GCGGCCAGCT CGCGCGGCAC ACGGACTGCT CCGGTCGCAG CCAGTCCTGG
CGCCACGGCG CCTGGGGCGA GGTAGTGGAG GCGACGGACG CGCTGGGCCA GCGCACCCAG
CTGCACCACG TGCTGGAACA CGGCGCACTG CGACTGGTGG GCGCGCAGCA CCCTGGCAAT
ACGGGCGTAC GTTATCGCTG GGGCCCTGAC GGTTTGCTGG CGGCAGCCAC GCATGGCACG
CACGACGTGC TGGAAGGCAC GGGCGAGCCT GAAGGCACCA GCACAACGGT CGCGTACCGG
CACGACCTCT GGGGCCGGGT GGTGGAACAG GTGCAGGCGG GCCGGGGCGT GCAGTTGCGC
TACGACGTGG CCGGGCGGCT GCAGGAGCTC GTCAACGAGA ACGGCGACGT GACGCGCTTC
GTGCACGACG CGGCCGACCG GCTGGTGCAG GAAGTGGGCT TCGACGGGCG CAGCCAGGTG
TATGGCTACG ACGCTGCCGG CCAGCTCACG CACACGGGCG ACGGGCATGG CGAGGGCCAC
CATCCGGGGG CGGCGGCGCG GCCGGAACTC GGGGCGGTGG TGCGCACGCG GCTGCACTAC
GACCTGGGCG GCCGGCTGGT GGCGCGCGTG GCCGTACGGC TGCCGGCAGC GGCATTGGCC
GGTGTTGGCG TCAGCGCCGC AGGTGATGCG CCCGACAACC CCACGGCTGA ACCGCATGCC
GTGCTGCAGA TCCAGCGCTT CGGGCACACC GCGGCCGGAG CCCTGCTGCA GGCGCGGACC
TGGGAGGCAG AACTGCCCCA CGGGATCGAG CCCATGGCCC TGCCAACGGC CCTGTCTCCC
GACTCCTCGC GCCCAGGCGC TGCCACAGGC CGACCCATCC CTCTCGCCGA ACGCTGGCTG
GCGTTGGATA CGCAGGCCTT GCTGTCCCTG CTGGACCGCC CGGGCGACCC GGTGCATGCG
CCGTTGGCCG CCGCGCTCCA GGCACAGAGG CTGCATCCAG AGGCCCGCGT GGCCCTGGCA
CGCGATGCTT TCGGGCGTAT GTGCGGAGAG ACGCAGACGC TGTACCGGCA GGCCACCCAG
CCGCAAGCGT CCCATGCCGG CGGCGAGCCG CCCGTGGAGT TCGAGCACGC GATCACCCAC
ACGCTGGGCC CGCTGGGCCA GCGCACGGCC ACTCAGGCGC AGGGCCTGGG CACGCTGCAG
TGGCTGGCCT ACGGATCAGG CCACGTGCAC GGGCTGCTGC TGGACGGCCA GCCGCTGGTG
GATTGGGAGC GCGACGCACT GCACCGTGAG GTGGAGCGCA CGCTGCACCT GCTGGAAGGC
CAAGGCAACG ACGACCTGCC GGCGATCGTG CATGCGCGGC AACTCGATCC GATGGGCCGG
ATGCTGCACC AGGACTGGCG CGGCCTGCGC CATGCGGCGG CCATGCCTGC GGCCGGAGAT
ACCGGTGGCA CGGACACGGG CCCGTCCTCG GCCGCAGGGC GCATCGCCCC GGCCCTGGGC
CCCCTCTCCA CACTCGCGCA GCGCCGCTAC TGGTACGACC CCCTGGGCCA ACTGGTCGGC
GTGCAGACGC CGGGCGAGGC CACGCGCTAC GGCTACGACG CCTGGCAGCG CCTGAGCGGG
CTGCACCGTG CGGGCCAGGG AGCGCCGGAA GTCCGGCAGC ACTGGGCGCT CGACCCTGCA
GGCAATCGCC TGCCCGCGCC CCCGGAGGCC GGCGTGGCGG CGCTGCACGC CGACCGGCAG
GCGTGGGCCC GCGAGGTGCG CGACCACCTG CAAGACCCGG ACTTCGACCT GCTGCGCGCG
GGCGGCGCAC CCGGCGAGGG TGCGGGCCCG GTCACGCACT GGCCGGGCAA TCGCATCGGA
TGGAGCACAC CAGAGCGGGA TGGCGACGGC CACGGCACCC CGATCCGCTA TCGCTACGAC
GCCTTCGGCA ACCGGGTGCA GGCGCTGCAC GCCGACGGCC GGGCGCAGCG CCTGCGCTAC
GACGCCCTGC ACCATTTGCG CGAAGTCTGG CAGCGCGAGG GAACGGGTGG CGCCTGGCAA
CGGGTGGCCT GCTACCGCTA TGACCCCTTC GGCCGGCGGC TGGCCAAGAC CGTCGTCGGC
GATAGCCGGC ACAGCCACGG AGCCGCACCG GGCTCTGCGG CCACGACCCA TGCTGGCTGG
GACGGTGACC GTCTGGTGCA TATCGAAGGC CCGCAGGGGC TGCAGCACAC GCTGTACGAG
CCGGACTCCT TCGTGCCGCT GTTGCGGCTG GAGCGGGACC AGGCCATCCC CACGCCCGTG
CAGGCCATGT TCGCGCTGGA AAACCAAGGC GGCGAATCCC ACGCGGCGGC TTTGTTCGCG
GGATTGCCGC GCGCACAGCG CGAATGGCTG GCGCAGGCGC TGACCGACGC CCTGGGGCCG
CAGGGCGATG CACCGCGATC CCGCCTGCAG GCAGGCCTGC CCGAAGCAAC CGGCGCACTG
CTCTCCGCGG GCCTCCGAGC CGTGCGCCAG CAACGGCAGG ACGCCACCCA GGCCCACGCG
ACGCGCATCC GCCATGTCCT GTGCGATCAC CTGGGCACGC CCATCGCGCT GGTGGATGCC
AACGGCCCGC AGGCGGGCCT GGTCACCTGG GCCGCGACCT ACCACGCCTG GGGTGCCGTG
CGCGAGGAAT ACGATCCGCA CGGTATCGGG CAGGACATCC GTTTCCAGGG CCAGCAGTTC
GATGACGAGA CGGGGTTGCA CTACAACCGG TTCCGGTACT ACGACCCGAT GCTGGGGCAG
TATGTGACGC AGGATCCGAT TGGGTTGGCT GGAGATATAA ACAAGCTAAT TTATCCAACG
AACCCGACTT CAAGCAACGA TCCTCTTGGA CTGAAGGAGG AAGGGGGATG GCTGTCGAAA
ATATTTGGTT GGGGTGAGAA AGCAAGCTCG GTGAAAGATG CTGTTGAAGC AGGGGCGCTT
GTATCGGAGA ACAAAAAGCT GCAGAAAGAA TTGGATAAAC TTGACGAAGA ATTGCTGTCA
TGCTTGTCTC AGTCGCCTAC TTGTCAAACG GGTAAAATCG AACAGATTGA AAAAAGAATG
AGTGAAATAA GGAAGAAAAT CCTTTCAAAC ACAGGAGAAG TAACAAAAAT CATGATGGAG
ACTCCCGGCA CGTCCGCAGG AGGTCCTATT CATATCCCAG GGATGAAGCC ATGA
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| Protein sequence | MSGKPAARQG DLTKKGGPIV QGSATVLIGS AGGVACSVCP GGMAVGNPVN PALGAKVLTG
GDELDFALPG PLPLAWQRVY SSYVNAEHGA ACGLLGYGWK LPLELRLVLQ DERAVLFDAS
GRAITFEEPL QPGQALHSSS EDLWLLRGGG MAGSTAPSST PAELLPWAQQ PRWSHVPAVL
RTDPGCVIAV PGAGGAGAPA WVFLPTGVSG DRVLHAVIDR FGRSQRYQWG TEGEQQGRVA
GITDGSGRRY ALRYERIAPD ATAARKPGKP DEGGQARHPL LGPDDGVRLV GVDCTFNPLD
PAVIPGAAPR PQPLVGYRYD SAGNLAEVLG ADGTVLRRFG YDALHRMTEH QVRQGPRHRY
VYEDQTAQGR RQGLAARPGA RVAEQHNEEG LSYFFEYSQA PAQPAPSTHT TQATQGPEDD
QDGPTPATAS LPSNRQSSTL VRDSLGRTTA YHFEGEGGLK RLVRLVAPDG AEQGFRYDSA
GRRLSATDAL GRTTWWRYDG AGRLLGVQGP DGRSTQQHWG AAGSAQDGLL LASQDAAGLR
TDFRYDDWGR LLEVAMAPAG SGDGATNTQV LTTRFEYEQP RQDAATGTTA GTTVFPPHSL
AWCDQPVAMI DAQGGRSLYA YNACGQLARH TDCSGRSQSW RHGAWGEVVE ATDALGQRTQ
LHHVLEHGAL RLVGAQHPGN TGVRYRWGPD GLLAAATHGT HDVLEGTGEP EGTSTTVAYR
HDLWGRVVEQ VQAGRGVQLR YDVAGRLQEL VNENGDVTRF VHDAADRLVQ EVGFDGRSQV
YGYDAAGQLT HTGDGHGEGH HPGAAARPEL GAVVRTRLHY DLGGRLVARV AVRLPAAALA
GVGVSAAGDA PDNPTAEPHA VLQIQRFGHT AAGALLQART WEAELPHGIE PMALPTALSP
DSSRPGAATG RPIPLAERWL ALDTQALLSL LDRPGDPVHA PLAAALQAQR LHPEARVALA
RDAFGRMCGE TQTLYRQATQ PQASHAGGEP PVEFEHAITH TLGPLGQRTA TQAQGLGTLQ
WLAYGSGHVH GLLLDGQPLV DWERDALHRE VERTLHLLEG QGNDDLPAIV HARQLDPMGR
MLHQDWRGLR HAAAMPAAGD TGGTDTGPSS AAGRIAPALG PLSTLAQRRY WYDPLGQLVG
VQTPGEATRY GYDAWQRLSG LHRAGQGAPE VRQHWALDPA GNRLPAPPEA GVAALHADRQ
AWAREVRDHL QDPDFDLLRA GGAPGEGAGP VTHWPGNRIG WSTPERDGDG HGTPIRYRYD
AFGNRVQALH ADGRAQRLRY DALHHLREVW QREGTGGAWQ RVACYRYDPF GRRLAKTVVG
DSRHSHGAAP GSAATTHAGW DGDRLVHIEG PQGLQHTLYE PDSFVPLLRL ERDQAIPTPV
QAMFALENQG GESHAAALFA GLPRAQREWL AQALTDALGP QGDAPRSRLQ AGLPEATGAL
LSAGLRAVRQ QRQDATQAHA TRIRHVLCDH LGTPIALVDA NGPQAGLVTW AATYHAWGAV
REEYDPHGIG QDIRFQGQQF DDETGLHYNR FRYYDPMLGQ YVTQDPIGLA GDINKLIYPT
NPTSSNDPLG LKEEGGWLSK IFGWGEKASS VKDAVEAGAL VSENKKLQKE LDKLDEELLS
CLSQSPTCQT GKIEQIEKRM SEIRKKILSN TGEVTKIMME TPGTSAGGPI HIPGMKP
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