| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3741 |
|---|
| Symbol | |
|---|
| ID | 4668834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4152797 |
|---|
| End bp | 4153645 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639824932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972062 |
|---|
| Protein GI | 120612384 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1568] Predicted methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0952103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.220518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG CTAATGGTCA ACTCGATTTG CGACGAGCCA TCAACGCGGT GTCTGACGTC
ATTCAGAACC GGCCGCAGCC GCTGCGAGAG TTCGACCAGA TTTATATGAA AGCTGGCGAC
ATGGTCCTGC AAACAAGCCT TATCGCGCAG AGGTTTGCCG GACGCAGGTT ACTTTTCATG
GGAGACGGGG ACAGCATCAG CTTGTGCTTG GCCTACCTCG TGAAGCGCGG GGTACTTGAG
GCCGGACCGG AAAGCATCCT AGTTCTCGAC TTTGATGAGC GCATGGTGCG CGCCGTCGAA
CGCTTCGCAG ACCGAGAGGG CATTTCTGAC CGGATCCAGT CGCGCCTCTA CAACTGCATC
GACGAGCTTC CTGCGGAACT TCTTGGTCAG TTCAATGCCT TCTACACAAA TCCACCATGG
GGTGCGCACA ACGCCGGGGA AAGTGTGAAG GTTTTCGTTG AGCGCTGCAT TGAGGCATCG
AGCGCCGATG CCGTTGGCGT GGTGGTGATT GCGGATGACC CAACCGTCCC ATGGTCCCAG
AAGGTGCTAG CTGAAACACA GGCCTTCGCA CTGGGTAAGG GCTTTTATGT TCAGGAGATG
CAGACGAAAC TGCATGAATA CCACCTTGAC GACGCGCCCG ACCTACGCTC TTGCAATCTC
TTTTTCCGAT CTCTGCCGGA CCGCAAGGTA GTACTCCGGA GTTACGGCCT TCATACACCA
CGGCTGGAGG ATTTCTACGG TCGCTCGCAA AATCTTCGCG TGCATTACGT ACGTGAGACC
AATCGTGTCG ACTATGGCAA GGCCTTTGAT GGCACCTACA ACCTCGAACA CCTAGGAGGC
AAATCATGA
|
|---|
| Protein sequence | MSKANGQLDL RRAINAVSDV IQNRPQPLRE FDQIYMKAGD MVLQTSLIAQ RFAGRRLLFM
GDGDSISLCL AYLVKRGVLE AGPESILVLD FDERMVRAVE RFADREGISD RIQSRLYNCI
DELPAELLGQ FNAFYTNPPW GAHNAGESVK VFVERCIEAS SADAVGVVVI ADDPTVPWSQ
KVLAETQAFA LGKGFYVQEM QTKLHEYHLD DAPDLRSCNL FFRSLPDRKV VLRSYGLHTP
RLEDFYGRSQ NLRVHYVRET NRVDYGKAFD GTYNLEHLGG KS
|
|---|
| |