Gene Aave_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3608 
Symbol 
ID4666589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3982074 
End bp3982598 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content73% 
IMG OID639824800 
Productputative lipoprotein 
Protein accessionYP_971933 
Protein GI120612255 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.341689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTGG CGTCCTTGCC CGCGGTGCCA CTGCGCCGCA GTCTGATCGG AGTCGTGGCA 
GGATTCGCGC TGGTGCTGGC CGGATGCGCC ACCCCGCCCC GCCCGCCCAG GACCGCGGCG
CAGCCGGGCA CGCGTCAGTG GAACGGCCGC ATGGCCCTGC AGGTGGACGA CCCCGCGGTG
GCGCCCGTCA GCGCCGGATT CGAGTTGAGC GGCGGACCGC AGCAGGGAGA GCTCGTGCTC
CTGAACCCTC TGGGCAACGT GCTCGCCACC CTGGAATGGT CCCCTGCCGG CGCCGTGCTG
CAAAAGGGCG GCGAGCGCCG CACTTCCCCA TCGCTCGACG CGCTGGTGCT CGAACTGACG
GGCAGCGCGC TGCCCGTCGC GGCGCTCTTC GCCTGGCTCG ATGGCGATGC CATAGCGATA
CCCGGCTGGA CGGTCGATAC CAGCAGGCTG GACGACGGCC GGCTGACCGC GCACCGCCAG
AGCCCGCTGC CGGAGGCCAC GCTGCGCATC GTGCTGGACC GCTGA
 
Protein sequence
MRVASLPAVP LRRSLIGVVA GFALVLAGCA TPPRPPRTAA QPGTRQWNGR MALQVDDPAV 
APVSAGFELS GGPQQGELVL LNPLGNVLAT LEWSPAGAVL QKGGERRTSP SLDALVLELT
GSALPVAALF AWLDGDAIAI PGWTVDTSRL DDGRLTAHRQ SPLPEATLRI VLDR