Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3590 |
Symbol | |
ID | 4667357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3960624 |
End bp | 3961601 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639824782 |
Product | glycoside hydrolase family protein |
Protein accession | YP_971915 |
Protein GI | 120612237 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.013688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00813315 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAC TGACATCGTT TCTGTTCGCG CTGTCGCTCT CCTTCGCCGG CGCGGCCGGT GCCGTACCCA TCGCTGCCGG CAAGCAGCGT TTCCTGGGGT GCGCCTACAG CGCCCCGGAG GCGCGGGATT TCGACAAGTA CTGGAACAAG GTCACGCCCG AAAACGCCGG GAAATGGGGC AGCGTGGAGG CGGTTCGCGG CCGCATGGAC TGGAGGGCTC TCGACGAGGC CTACAACTTC GCCAAAAAGA ACCACATGCC TTTCCAGTTC CACCAACTGA TCTGGGGCAG CCAGCAGCCG ACCTGGGTGC GGACGTTGCC GCCGGCAGAG CAACGTGCCG CGATCGAGCA TTGGTTCGCC TCGGTGGCGC AGCGCTACCC TGACATCGAT TTCATGGAAG TGGCCAACGA AATACTGCCG GGCCACAACC AGCCCGACGG CAGGTACCCT GACAGCGGCA ATTACATGCA GGCGCTGGGT GGTGCAGGTG CCTCCGGCTG GGACTGGGTT CTGCAGGCGT TCCGGCTGGC GCGGCATTAC TTTCCCCGGT CCAAGCTGAT GATCAATGAC TTCGGCATCA CTGGCAGCGC CAACGCCACC CGCCAATATC TCCGGATCAT TCAGTTGCTG CAGCGCGAAC ATCTGATCGA TGGGATCGGC CTGCAGGAAC ATGCCTTCGA GACCGCTTAC GCGCCCATGT CGCTGCAGCG CTCCAATCTC GACATCCTGG CTTCCACCGG CGTGCCGATC TACGTCACCG AATTCGATCT GGACGGGGCG ACCGATGCCC AACAGTTGGC CAGCTACCAA CGCATTTTCC CGATGTTCTG GGAACACCCG GGCGTACGCG GCGTGACCCT GTGGGGCTTC CGGCCCGGCC TGTGGCGCGA CGCCGAACGT GCCTATCTGG TCCGGCAGAA CGGCATGGAG CGCCCGGCGC TGGTGTGGCT GCGCAACTAC GTGGCGAGCA GGTCGTGA
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Protein sequence | MKKLTSFLFA LSLSFAGAAG AVPIAAGKQR FLGCAYSAPE ARDFDKYWNK VTPENAGKWG SVEAVRGRMD WRALDEAYNF AKKNHMPFQF HQLIWGSQQP TWVRTLPPAE QRAAIEHWFA SVAQRYPDID FMEVANEILP GHNQPDGRYP DSGNYMQALG GAGASGWDWV LQAFRLARHY FPRSKLMIND FGITGSANAT RQYLRIIQLL QREHLIDGIG LQEHAFETAY APMSLQRSNL DILASTGVPI YVTEFDLDGA TDAQQLASYQ RIFPMFWEHP GVRGVTLWGF RPGLWRDAER AYLVRQNGME RPALVWLRNY VASRS
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