Gene Aave_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3590 
Symbol 
ID4667357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3960624 
End bp3961601 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID639824782 
Productglycoside hydrolase family protein 
Protein accessionYP_971915 
Protein GI120612237 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00813315 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC TGACATCGTT TCTGTTCGCG CTGTCGCTCT CCTTCGCCGG CGCGGCCGGT 
GCCGTACCCA TCGCTGCCGG CAAGCAGCGT TTCCTGGGGT GCGCCTACAG CGCCCCGGAG
GCGCGGGATT TCGACAAGTA CTGGAACAAG GTCACGCCCG AAAACGCCGG GAAATGGGGC
AGCGTGGAGG CGGTTCGCGG CCGCATGGAC TGGAGGGCTC TCGACGAGGC CTACAACTTC
GCCAAAAAGA ACCACATGCC TTTCCAGTTC CACCAACTGA TCTGGGGCAG CCAGCAGCCG
ACCTGGGTGC GGACGTTGCC GCCGGCAGAG CAACGTGCCG CGATCGAGCA TTGGTTCGCC
TCGGTGGCGC AGCGCTACCC TGACATCGAT TTCATGGAAG TGGCCAACGA AATACTGCCG
GGCCACAACC AGCCCGACGG CAGGTACCCT GACAGCGGCA ATTACATGCA GGCGCTGGGT
GGTGCAGGTG CCTCCGGCTG GGACTGGGTT CTGCAGGCGT TCCGGCTGGC GCGGCATTAC
TTTCCCCGGT CCAAGCTGAT GATCAATGAC TTCGGCATCA CTGGCAGCGC CAACGCCACC
CGCCAATATC TCCGGATCAT TCAGTTGCTG CAGCGCGAAC ATCTGATCGA TGGGATCGGC
CTGCAGGAAC ATGCCTTCGA GACCGCTTAC GCGCCCATGT CGCTGCAGCG CTCCAATCTC
GACATCCTGG CTTCCACCGG CGTGCCGATC TACGTCACCG AATTCGATCT GGACGGGGCG
ACCGATGCCC AACAGTTGGC CAGCTACCAA CGCATTTTCC CGATGTTCTG GGAACACCCG
GGCGTACGCG GCGTGACCCT GTGGGGCTTC CGGCCCGGCC TGTGGCGCGA CGCCGAACGT
GCCTATCTGG TCCGGCAGAA CGGCATGGAG CGCCCGGCGC TGGTGTGGCT GCGCAACTAC
GTGGCGAGCA GGTCGTGA
 
Protein sequence
MKKLTSFLFA LSLSFAGAAG AVPIAAGKQR FLGCAYSAPE ARDFDKYWNK VTPENAGKWG 
SVEAVRGRMD WRALDEAYNF AKKNHMPFQF HQLIWGSQQP TWVRTLPPAE QRAAIEHWFA
SVAQRYPDID FMEVANEILP GHNQPDGRYP DSGNYMQALG GAGASGWDWV LQAFRLARHY
FPRSKLMIND FGITGSANAT RQYLRIIQLL QREHLIDGIG LQEHAFETAY APMSLQRSNL
DILASTGVPI YVTEFDLDGA TDAQQLASYQ RIFPMFWEHP GVRGVTLWGF RPGLWRDAER
AYLVRQNGME RPALVWLRNY VASRS