| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3590 |
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| Symbol | |
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| ID | 4667357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3960624 |
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| End bp | 3961601 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639824782 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_971915 |
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| Protein GI | 120612237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.013688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00813315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TGACATCGTT TCTGTTCGCG CTGTCGCTCT CCTTCGCCGG CGCGGCCGGT
GCCGTACCCA TCGCTGCCGG CAAGCAGCGT TTCCTGGGGT GCGCCTACAG CGCCCCGGAG
GCGCGGGATT TCGACAAGTA CTGGAACAAG GTCACGCCCG AAAACGCCGG GAAATGGGGC
AGCGTGGAGG CGGTTCGCGG CCGCATGGAC TGGAGGGCTC TCGACGAGGC CTACAACTTC
GCCAAAAAGA ACCACATGCC TTTCCAGTTC CACCAACTGA TCTGGGGCAG CCAGCAGCCG
ACCTGGGTGC GGACGTTGCC GCCGGCAGAG CAACGTGCCG CGATCGAGCA TTGGTTCGCC
TCGGTGGCGC AGCGCTACCC TGACATCGAT TTCATGGAAG TGGCCAACGA AATACTGCCG
GGCCACAACC AGCCCGACGG CAGGTACCCT GACAGCGGCA ATTACATGCA GGCGCTGGGT
GGTGCAGGTG CCTCCGGCTG GGACTGGGTT CTGCAGGCGT TCCGGCTGGC GCGGCATTAC
TTTCCCCGGT CCAAGCTGAT GATCAATGAC TTCGGCATCA CTGGCAGCGC CAACGCCACC
CGCCAATATC TCCGGATCAT TCAGTTGCTG CAGCGCGAAC ATCTGATCGA TGGGATCGGC
CTGCAGGAAC ATGCCTTCGA GACCGCTTAC GCGCCCATGT CGCTGCAGCG CTCCAATCTC
GACATCCTGG CTTCCACCGG CGTGCCGATC TACGTCACCG AATTCGATCT GGACGGGGCG
ACCGATGCCC AACAGTTGGC CAGCTACCAA CGCATTTTCC CGATGTTCTG GGAACACCCG
GGCGTACGCG GCGTGACCCT GTGGGGCTTC CGGCCCGGCC TGTGGCGCGA CGCCGAACGT
GCCTATCTGG TCCGGCAGAA CGGCATGGAG CGCCCGGCGC TGGTGTGGCT GCGCAACTAC
GTGGCGAGCA GGTCGTGA
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| Protein sequence | MKKLTSFLFA LSLSFAGAAG AVPIAAGKQR FLGCAYSAPE ARDFDKYWNK VTPENAGKWG
SVEAVRGRMD WRALDEAYNF AKKNHMPFQF HQLIWGSQQP TWVRTLPPAE QRAAIEHWFA
SVAQRYPDID FMEVANEILP GHNQPDGRYP DSGNYMQALG GAGASGWDWV LQAFRLARHY
FPRSKLMIND FGITGSANAT RQYLRIIQLL QREHLIDGIG LQEHAFETAY APMSLQRSNL
DILASTGVPI YVTEFDLDGA TDAQQLASYQ RIFPMFWEHP GVRGVTLWGF RPGLWRDAER
AYLVRQNGME RPALVWLRNY VASRS
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