| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3566 |
|---|
| Symbol | |
|---|
| ID | 4668500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3938711 |
|---|
| End bp | 3939532 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971891 |
|---|
| Protein GI | 120612213 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3752] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATT TCTTTGGCAC AGACGCCTGG CAGGCCGCGC TGGGCGGCCT GGCATGGACC
GCCGGCGTGG CCCTGGCCAC CTGGGCCGCC AGCCTGGCAC GCCGCGACGC GAGCCTCGTG
GACCGGGTCT GGGGCCCCAT GATCGCCGGG GCCGGCGTGG TGTATGCCCT GCGGCTGAAC
CCTGCGTCCG AGGGCGGCGC GGCATGGTGG GCCGTCGGCG TGGCGGCCGC CTGGGCGGCC
CGGCTCGCCG TCTTCATCAC GCTGCGCAAC TGGGGCCACG GCGAGGACCG TCGCTACCAG
GCCATGCGGG AGCGCCACGG CGAGCGCTTC GGGCTCAGGA GCCTGTACCT GGTCTTCGGC
CTGCAGGCGG TGCTGGCGTG GGTGGTATCC GCCCCTCTTT TCGCCGCGGT GGCGCTTCTT
CGTCCGGGGC CTGCCTGGCA GGCCCTGCCC GGCCTGGCCC TGGCCGTTTT CGGCCTGGTG
TTCGAGGCCG TGGGGGATGC GCAGATGGCC CGGTTCAAGC GCCGTGGCAG CGGAGCAGAC
CGCGTGATGG ACCAGGGCCT CTGGCGCTAC ACCCGGCACC CCAACTACTT CGGCGAGGCC
TGCGTGTGGT GGGGCCTGTG GCTGGCGGCC CTGGGCCTGG CAGGCATGCC GGCGTTCTGG
AGCATCGCCT CGCCCCTGCT CATGACCACG CTGCTCCTGC GGGTCTCGGG GGTGGCGCTG
CTCGAAAAGG ACATGCCCTC GCGCAGGCCG GCCTATCGCG AATACCAGCG CCGCACGAGC
GCCTTCATCC CGATGCCGCC GCGGCCCGGG AGGCCCTCGT GA
|
|---|
| Protein sequence | MADFFGTDAW QAALGGLAWT AGVALATWAA SLARRDASLV DRVWGPMIAG AGVVYALRLN
PASEGGAAWW AVGVAAAWAA RLAVFITLRN WGHGEDRRYQ AMRERHGERF GLRSLYLVFG
LQAVLAWVVS APLFAAVALL RPGPAWQALP GLALAVFGLV FEAVGDAQMA RFKRRGSGAD
RVMDQGLWRY TRHPNYFGEA CVWWGLWLAA LGLAGMPAFW SIASPLLMTT LLLRVSGVAL
LEKDMPSRRP AYREYQRRTS AFIPMPPRPG RPS
|
|---|
| |