Gene Aave_3559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3559 
Symbol 
ID4668961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3932801 
End bp3933670 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID639824750 
Producthypothetical protein 
Protein accessionYP_971884 
Protein GI120612206 
COG category[S] Function unknown 
COG ID[COG4329] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.804101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.917647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC GAGCGATGCA TCAAGACACC TTGCACGGCG GCAACCTGCG CCCGCTGGCC 
TGGGCCGGCG GATGCATCGG GTTCAGCCTG GGCGGGTTCT TCGACGGCAT CCTGCTGCAC
CAGATCCTGC AGTGGCACCA CCTGCTGAGC CGCGTGCGCT CGCCCGTGCT GGAGAACATC
CGCCTGCAGA TCCTGGCGGA CGGATTGTTC CACGCGCTGA TGTACGTCAT CGCCGCCGTG
GGAATCTGGA AGCTTTGGAA GTCGCGCGCC CTGTGCGCCC TGCCACGGGC GGACCGCACG
TTGTGGGGGC ATGCGCTGAT GGGCTTCGGC CTGTGGCACC TGCTGGATGC CGTGCTGTCC
CACTGGGTGC TCGGCCTGCA CCGCGTGCGC GATGCCGCCG AGATCCCGCT GCTGTGGGAT
GTGGGGTGGC TTGCCGTGTT CGGGCTGCTG CCTTTGTGGT TCGGCTGGCG CGCACGTCGC
GGGCCCCCTG CAGGGCAGGG GGGCGCGGAT GTTCCCCGTC CGCAGGACGG CAGCGTGCCC
GCGCGGAGTC CCGGCACGCC GGGCCGGTGG CTGTCCGCCG TGCTGATCGT GACCGGTGCC
GCGCTCGCCT CCGTGTGGCC GCAGGCCGGA CGCGGCGGCG ATGTGATGGT GCTGTTCGGA
CCCGGCGTCC CCGCTGCGGC GGCCATGGAG CGGTTGTCCG CAGTCGATGC CCGCGTCATG
TGGGCGGACC GTTCCGGTGC CCTGTGGGCC GTGCGGCTCG AAGACCCTGC GGCGGCCCGC
CGGCTGTACG GGCAGGGCGC GTGGCTGGTA GGCGACTCGC GCCTGCGCTG GGGGTGCCTG
TCCTGGATGG GTGCCGGTCC GTCCACGTGA
 
Protein sequence
MPARAMHQDT LHGGNLRPLA WAGGCIGFSL GGFFDGILLH QILQWHHLLS RVRSPVLENI 
RLQILADGLF HALMYVIAAV GIWKLWKSRA LCALPRADRT LWGHALMGFG LWHLLDAVLS
HWVLGLHRVR DAAEIPLLWD VGWLAVFGLL PLWFGWRARR GPPAGQGGAD VPRPQDGSVP
ARSPGTPGRW LSAVLIVTGA ALASVWPQAG RGGDVMVLFG PGVPAAAAME RLSAVDARVM
WADRSGALWA VRLEDPAAAR RLYGQGAWLV GDSRLRWGCL SWMGAGPST