| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3554 |
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| Symbol | |
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| ID | 4669332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3927803 |
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| End bp | 3928480 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639824745 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_971879 |
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| Protein GI | 120612201 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.431306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.623336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCATA ACAGTTTGTT GTACTCCTTA CGTTCGCGCT GGCGGACGGG AGACGCATCG
CCACGGCGCA GGGAGTCAGG GTTTACCCTG GTGGAGGTGC TGGTGTCGAT CGTGGTGCTC
TCGTTCGGCA TCCTGGGGCT GGTCGGGGTG CAGGCCTTCG CGCTGCAATC GACCCGGGAG
GCCCGCCTGC AGGCCCAGGC GGCCAACCTG GCGCGGGAGA TGACTGAACT GATGCGGGGA
AACAACCAAA TTGCCATCAA GAGCGATGCC AGTTTGAATC CGTATCTCAT CAATCTGCAG
AGCCCGTTGA GCCCGGCTAC CGCCAATTAT TGCCTGGGCG TGGCCTCGTC GTCCGCGTGC
GCGGATGGGA CGGCTGTGGC GCGTGCGGAA CTGACCGATT GGCTTACGCG GCTGGATGCG
GCCCTGCCCG GAGCGCGGGT GGTCATCTGT TTCGACAAGG CGCCCTACGA CAGCAACGGC
ATGCCGCGAT GGGACTGCAC TCCTGGAGCC GCTGGCGTGG ATGAGGTGGC GGTCGTCAAG
ATCGGTTGGA CCCGCAAATC CACGCTGCGC GCGTCTGCCA CCAGTGACGG CGTGGAAACC
GCCACGGCCA GCGGCAGCTA TCCCTACGTG GTGTTTCCCG TCACGAGCGG CAACCCGGTG
GAAGCCCCTT CGCTATGA
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| Protein sequence | MDHNSLLYSL RSRWRTGDAS PRRRESGFTL VEVLVSIVVL SFGILGLVGV QAFALQSTRE
ARLQAQAANL AREMTELMRG NNQIAIKSDA SLNPYLINLQ SPLSPATANY CLGVASSSAC
ADGTAVARAE LTDWLTRLDA ALPGARVVIC FDKAPYDSNG MPRWDCTPGA AGVDEVAVVK
IGWTRKSTLR ASATSDGVET ATASGSYPYV VFPVTSGNPV EAPSL
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