| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3552 |
|---|
| Symbol | |
|---|
| ID | 4669632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3926113 |
|---|
| End bp | 3926760 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639824743 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_971877 |
|---|
| Protein GI | 120612199 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4726] Tfp pilus assembly protein PilX |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCCC GTTCTCACCT CGAAGACCAA GTATGGGGCG TGGTTTCCCG TCGCCAGGCA
GAGGCAGGCA TGTCGCTGAT CGTCGTCCTG CTGATCCTGG TAGTGGTATC CATCCTGGGC
GTGGCGGGCA TCCAGATCTC GATGATGGGC GAGCGCTCGA CCCGCAACGA CCGCGACAAG
CAGGTGGCGT GGCAGTCCGC GGAGGCGGCG CTCATCGATG CGGAACTGGA CATCCTGGGC
AAACCCGATG CCTCCACGGT GACCAAGCGT GGGGAAGTGT TCAAGCGCGG CAGCACGGAC
GTCGGGAAAT TTCTTCCGGG TTGCGGCGGC GATCGGGACG CCAAGAACCT GGGCCTGTGC
TATTCCCCGT CCGGGGCGGC GCCTGCATGG CTGACGGTGG ATCTGGCGGC ATCCACCAAT
CCCCAGTCCG TGGCTTTCGG CACGTTTACC GGGCGTGCGT TTCCGTCGGG TCAGGCTGGC
CTGCAGCCCG CTGCGCCGCC GCGCTACGTG ATCGAACTGG TCGAAGACCC CACAGACGCC
CGCACCACGG CGCCCAAGGA CCGCAAATAC ATCTACCGCG TGACCGCCAT GGGATTCGGC
CCCAGTGCCT CCACCCAGGG CGTACTGCAG ATCGTCTACA GAAACTGA
|
|---|
| Protein sequence | MMSRSHLEDQ VWGVVSRRQA EAGMSLIVVL LILVVVSILG VAGIQISMMG ERSTRNDRDK
QVAWQSAEAA LIDAELDILG KPDASTVTKR GEVFKRGSTD VGKFLPGCGG DRDAKNLGLC
YSPSGAAPAW LTVDLAASTN PQSVAFGTFT GRAFPSGQAG LQPAAPPRYV IELVEDPTDA
RTTAPKDRKY IYRVTAMGFG PSASTQGVLQ IVYRN
|
|---|
| |