| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3550 |
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| Symbol | |
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| ID | 4669791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3921112 |
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| End bp | 3921606 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639824741 |
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| Product | Tfp pilus assembly protein PilE |
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| Protein accession | YP_971875 |
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| Protein GI | 120612197 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.844187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTCC ATCGTTCAAA CCGTGGTTTT TCCCTGCTGG AGCTGATGAT CGTTGTGGCG
GTGGTCGGCA TCCTGGCTGC GGTAGCTTAC CCCGCCTATA CCGACTCCGT GCTCAAGGGG
CGGAGGGCCC AGGCGCGCAC GGCTCTGGCG GAGCTGATGC AGCAGCAGGA GCGATTCCTG
ACGCAGCGCA ATTGCTACCT CGGATTCAGC AACAGCGGAG GCACTGCGAC CGCCACGGCG
AATACGGCTT GCGGTATCGC GGCATCCTTC ACCGTGCCTT TCAAGACGTA TGCGGGAGAA
AGCCTCGGCT CGGCCAGCTA CCAGCTGTCG GCCACGACCT GCAGCAGCAC CCTGACGCTG
TCGGACTGTG TCAAGGTGGT GGCCAGCCCG GTCAAGTCGG ACCCTGCCGT GGGTGATCTC
TCTCTCACCA GTACGGGGGT CAAGTCGTGT ACGGGCACGG CCAGCAGCAC CAATCCCAAG
CTGTGCTGGC CATGA
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| Protein sequence | MTVHRSNRGF SLLELMIVVA VVGILAAVAY PAYTDSVLKG RRAQARTALA ELMQQQERFL
TQRNCYLGFS NSGGTATATA NTACGIAASF TVPFKTYAGE SLGSASYQLS ATTCSSTLTL
SDCVKVVASP VKSDPAVGDL SLTSTGVKSC TGTASSTNPK LCWP
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