| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3488 |
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| Symbol | |
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| ID | 4668122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3855131 |
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| End bp | 3856189 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639824682 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_971817 |
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| Protein GI | 120612139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.162088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.490615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCCCG CCGGGGCGGC CCCCGCGGAG ACGGCCGTTG CCCCGCCGGC GCCGTCGGCT
TCCGCACCCC GGGCGGCCGC GCCCTACCGG CTGCGCATCG TCGGCAACCT GGGCGCGCTG
TCTCAGTATT CCAGGCGCGA GGCGCCGTTC TGGACCCAGG ATCTTCCGCG GCTGAGCGGC
GGACGTTTCA CCGCCTCCAT CGTGCCCTTC GACCGCGCGG GCGTGCCCGG CATCGAGATG
CTGCGCCTGA TCGAACTCGG CGTGGTGCCC CTGGGCACCG TGCTGATGAG TTCGCTCACC
GCCCAGTACC CGAAATACAC CGCCGCGGAC CTGCCGGCGC TCAACCCCAC CCTGGCGGAC
CTGCGGGCCT CGGTGCAGGC ATTCCGGCCC TATCTGCAGG AGGAACTGCG CAGGCACCAC
CATTTCGAGA TGCTGGCGGT GTACGTCTAT CCCGCCCAGG TGCTGTTCTG CAAGAACGCC
CTGTCGGGGC TGGCGGACCT CAAGGGGCGG CGCGTGCGGG TCTCGTCCGC GTCGCAGGCG
GATTTCATCG CCTCGCTGGG CGGCGTGGCC GTCTATACGG GCTTCGGCCA GATGGTGCCG
AGCCTGCAGG CGGGCGACAG CGAATGCGCC ATCACCGGAA CCATGTCGGG CAACACCCTC
GGCCTGCACC GGATGACCCG CTACCTGCAC ACGCTGCCCA TCACCTGGGG GCTGTCGTTC
TTCGGCGCCA ACGACGAGGC GTGGGCCGCC ATGCCCCCCG AACTGCGGGC CCTGCTGCTG
CGCGAGCTGC CCCGGCTGGA AGATGCCATC TGGCGCGATG CGGAGGCCGA GACGCAAGAG
GGCGTGGCCT GCAACAGCGG CGCACCGGCC TGCGTGCACG GCGAGAAGGG CTCCATGGTC
GTGGTGCCGC TGTCGCCCGA GGACGACGCC CGGCGCCTGC GCCTGCTTTC CGAATCCGTG
CTGCCCAACT GGCTGCGCCG CTGCGGCGAG GGCTGCGCCG CCGTCTGGTC CAGCACGGTG
GGCCGGGCGC GCGGCATCGC CGTGCCGGAG AGCCCGTGA
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| Protein sequence | MLPAGAAPAE TAVAPPAPSA SAPRAAAPYR LRIVGNLGAL SQYSRREAPF WTQDLPRLSG
GRFTASIVPF DRAGVPGIEM LRLIELGVVP LGTVLMSSLT AQYPKYTAAD LPALNPTLAD
LRASVQAFRP YLQEELRRHH HFEMLAVYVY PAQVLFCKNA LSGLADLKGR RVRVSSASQA
DFIASLGGVA VYTGFGQMVP SLQAGDSECA ITGTMSGNTL GLHRMTRYLH TLPITWGLSF
FGANDEAWAA MPPELRALLL RELPRLEDAI WRDAEAETQE GVACNSGAPA CVHGEKGSMV
VVPLSPEDDA RRLRLLSESV LPNWLRRCGE GCAAVWSSTV GRARGIAVPE SP
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