Gene Aave_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3455 
Symbol 
ID4667418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3818051 
End bp3818875 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content71% 
IMG OID639824651 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_971786 
Protein GI120612108 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.445603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.607704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC GCCACGGCGG CTTCGCTCCT TCGCGCGCCC TGCTGGCCGC GTGCGCCGCG 
CCGGCCGTGG CGTTCTTCGC GGCCTTCTGG CTGCTGCCCA CGGCCCTGCT GGTGGCGCTG
CCGGCGCGCC AGGGCTGGGC GACGTATTTC GCGGTGCTGA CGAACGGCCG CTACCTGCAG
AGCCTGCTGC AGACGCTGGG TCTGTCGCTG GCCGTGACGC TCGCCACGCT GATGCTCGGC
GCCCTGGTGG GCATCACGCT GGCGCGCCAG CGCTTTCCCG GGCGGCAGCT GCTGCTGTCG
CTGCTGACGC TGCCGCTGTC CTTTCCCGGC GTGATCGTGG GATTCTTCAT GATTTTGCTG
GGCGGTCGCC AGGGCACGCT GGCGGGCCTG ACGCAGGCGC TGGGCTGGGG CCGGATCACC
TTCGCCTATG GGCTGGTGGG CCTGTTCCTG GCCTACCTGT ACTTTTCGCT GCCGCGCGCC
ATCGCCACCT ACACGGCGGC GGCCGGCGCC ATGGACGCGC AGCTCGAAGA AGCCGCGCGC
TCGCTCGGCG CCTCGCGCTG GCGCGTGGCG CGCGACGTGT GGATGCCGGC GCTCGCGCCC
ACCACGCTGG CCTGCGGCGC GATCGTGTTC GCCACGGCCA TGGGCGCCTT CGGCACGGCG
TTCACGCTGT CGGCGAAGTT CGAGGTGCTG CCCATCACCA TCTACGACGA ATTCACCAAC
TACGCCAACT TCGCGCTGGC AGCCAGCCTG TCGATCGCGC TGGGCCTGAT CACCTGGCTG
GTGCTCTGGG TGTCCCGCCG CTGGGCCGGC ACGTCCGCGT TCTAA
 
Protein sequence
MTARHGGFAP SRALLAACAA PAVAFFAAFW LLPTALLVAL PARQGWATYF AVLTNGRYLQ 
SLLQTLGLSL AVTLATLMLG ALVGITLARQ RFPGRQLLLS LLTLPLSFPG VIVGFFMILL
GGRQGTLAGL TQALGWGRIT FAYGLVGLFL AYLYFSLPRA IATYTAAAGA MDAQLEEAAR
SLGASRWRVA RDVWMPALAP TTLACGAIVF ATAMGAFGTA FTLSAKFEVL PITIYDEFTN
YANFALAASL SIALGLITWL VLWVSRRWAG TSAF