Gene Aave_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3403 
Symbol 
ID4668570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3759607 
End bp3760506 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID639824599 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_971734 
Protein GI120612056 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.391114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC CGGGGCAGCA GCATCCGCAG GGGGTGGCGC CGGAGACGGC GCAGCCCTCC 
GCCCATCCTC CCTCGGGCTC CGGCCCGGGG GCGCAAGATC CCTTCCTCCT CGACGCCGAC
CTGCGCCGCC GCTTCGGTGG GCTGGAGCGC CTCTACGGCG TGGAGGGGGC CGCCCGCATC
CGCGCGGCCC ACGTCGCCGT GGTCGGCGTG GGCGGTGTCG GCTCCTGGGC CGTCGAGGCC
CTGGCCCGCA GCGGGGTGGG GCGGCTCACG CTCATCGACC TCGACAACGT GGCGGAATCC
AACGTGAACC GCCAGATCCA CGCCCTGTCC ACCACCGTGG GACAGGCCAA GGTCGAGGCC
ATGCGCGACC GCATCGCGCT GATCCACCCG GGCTGCCAGG TGCACTGCAT CGAGGAATTC
GTCGATCCCG GCAACTGGCC CGCCATCCTG CCCGAGGGCG TGGACGCGGT CATCGACGCC
TGCGACCAGG TCCACGCCAA GACCGCCATG GCGGCCTGGG CGCTGAAGCT GCGGCATGGC
CACCACCGCT TCATCAGCGT GGGGGCGGCC GGCGGCAAGC GCCTGGCCCA CAAGGTGGAC
ATCGACGATC TTTCGCAGAC CACGCACGAC CCCTTGCTCG CGCAGCTGCG CTACCGCCTG
CGCAAGCAGC ACGGCGCCGC GCGCGAAGGG CGCCGCATCG GCATCACCTG TGTTTTCAGC
CGCGAAGCCG TGGCACCTCC GCATGCCTCG TGCGCGCTGG ATGCCGGCGC GGACGGCACC
CTGAACTGCC ACGGCTACGG CTCGGTGGTG TCGGTCACCG CCACCTTCGG CCAGTGCGCC
GCCGGCTGGG TGCTCGATCG GCTCGCGGAA TCTGGTTCGG GCCCTAAAGT AGCGCTATAA
 
Protein sequence
MSTPGQQHPQ GVAPETAQPS AHPPSGSGPG AQDPFLLDAD LRRRFGGLER LYGVEGAARI 
RAAHVAVVGV GGVGSWAVEA LARSGVGRLT LIDLDNVAES NVNRQIHALS TTVGQAKVEA
MRDRIALIHP GCQVHCIEEF VDPGNWPAIL PEGVDAVIDA CDQVHAKTAM AAWALKLRHG
HHRFISVGAA GGKRLAHKVD IDDLSQTTHD PLLAQLRYRL RKQHGAAREG RRIGITCVFS
REAVAPPHAS CALDAGADGT LNCHGYGSVV SVTATFGQCA AGWVLDRLAE SGSGPKVAL