Gene Aave_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3360 
Symbol 
ID4665953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3716907 
End bp3717899 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID639824556 
Productrestriction endonuclease 
Protein accessionYP_971692 
Protein GI120612014 
COG category[S] Function unknown 
COG ID[COG4127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.271395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA TGTGGATGGT GCGCGGTGAA GGCGGCAGCC TGTACGACGC TTTTCGGGAA 
CGCGGCGTAG CTGCCGTGGG CTGGAACCAG TTGGCGGCAC ATGCCAAGCC CGGTGTCGGG
CGCAAGCAGT TGATCGCCCT GTACCAGTCC GCCGAGCCCC TGGCAAAACA AGGCACGGTG
GTTTCGGGCG CATCCCAGGT CTGGCGCTTC GTCAACGACA TTGAGGAGGG TGACTGGGTC
ATCACCTATT CGCCCGCCAA TCGCCTGTAC TCAATCGGCA ATGTCACTGG ACCAGCCGAG
TACCACCCTG AGTGGGCCGA GCAAGGCATG CCCCTGGTGC GCAAGGTGCA GTGGCAAGCG
CAGGAACTGC CGCGCGATAA CTTGGGCACG AGCAGCAAAA ACAGCCTGGG TTCGACCCTG
ACCCTCTTTG AGGTACCGCC CAGCGCGGCA GCCGAAGTGC TGGCCGCACT GAAGGGTAAA
CCGGCACCAA CAGTGGAAGA GGAGGCCGAG GAAGTCATCG CCGATCCGCT GGCCGACATC
GAGTCTCAGG CGCTGGAACG CATCAAGGAC CGGGTCAACG AACTGGACTG GGACGACATG
CAGCAATTGG TCGCCGGCAT CCTGCGCGCC ATGGGCTACA AGACCCAGGT CTCGCCGCCC
GGCTCCGACC GTGGGAAGGA CATCGTGGCC TCCCCGGATG GCTTCGGCTT CGAGCACCCG
CGCATCGTCG TAGAGGTCAA GCATCGCAAG GGACAGATGG GTAGCCAGGA GATTCGTAGC
TTCCTCGGCG GCCGCCACAA GGATGATCGC GGGCTGTATG TCAGCACGGG CGGTTTCAGT
AAGGACGCTC TGTACGAAGC TGACCGCGCC TCCATTCCGT TGGCGATGTG GACGCTGGAC
CACGTAGTGC GGGCGCTGAT TGAGCACTAC GACGGGACCG ACGCTGAAAC CAAACGGATC
GTGCCGTTGA AGCGGCTGTA CTGGCCGGCC TAA
 
Protein sequence
MTRMWMVRGE GGSLYDAFRE RGVAAVGWNQ LAAHAKPGVG RKQLIALYQS AEPLAKQGTV 
VSGASQVWRF VNDIEEGDWV ITYSPANRLY SIGNVTGPAE YHPEWAEQGM PLVRKVQWQA
QELPRDNLGT SSKNSLGSTL TLFEVPPSAA AEVLAALKGK PAPTVEEEAE EVIADPLADI
ESQALERIKD RVNELDWDDM QQLVAGILRA MGYKTQVSPP GSDRGKDIVA SPDGFGFEHP
RIVVEVKHRK GQMGSQEIRS FLGGRHKDDR GLYVSTGGFS KDALYEADRA SIPLAMWTLD
HVVRALIEHY DGTDAETKRI VPLKRLYWPA