Gene Aave_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3331 
Symbol 
ID4666106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3683571 
End bp3684425 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content71% 
IMG OID639824528 
ProductIclR family transcriptional regulator 
Protein accessionYP_971664 
Protein GI120611986 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.181508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGA CAAGCGGACG CAAGGCACAG CGGGCGGGAG CCCGTGCAAC GAAACGGGAG 
GCCGGCATCG CGGCGGAGGC GGCGTCTGCC GCGGCCGACG CGGGGCGCTC CCCGGAATCG
AGCCTGTCGC GCCTGCTCGC CACGCTGGGG CTGTTCTCCA CGGCCAGGCC CTCCTTGATG
GCCGACGAGA TTGCCGCCGA GCTGGGCGTG CCCCAGAGCA CGGCCTACCG GTACATCCAG
GAACTCACGA AGGTGGGTCT GCTGGTGCGG CTGGACCGCA GCATCACGCT GGGCCCCCGC
ATCATCGAAC TGGACCGCTG CATCCGGGAA TCCGATCCGG TGATCCGCGC CGCGGTGCCG
CCGATGCGCG AACTGGCGGA GCAGACGGGG CTGGACGTTT TCCTGTCCAA GCTCTACGGC
CATTCCATCA TCACGGTGCA CACGGAATCC CATGATCCCC AGCCGCGGCT GCGCTATGGG
CGGGGCCGCC CGGTCCCCGT GCTGCAGGGC GCCAGCTCCA AGGCCCTGGT GGCGTTCCTG
CCGGCCGCGC GGCTGCGGCG GCTGCACCAG GAACTGGCCG GCGAATCCGG CGACGTGCCC
TCCTGGGAGG TTTTCTACGA GATGGCGCAG CGCATCCGCC GCGACGGCTA CTGCCGCACG
TCGGGCGAGC TGAACGAGGG CCGGACAGGG GTGTCGGCGC CGATCTTCGG GCGCGGGCGG
CTGGTGGTGG CGAGCGTCAC GGCGCTGGGC AGCGACGCGC GGATGGCGCT GTTCAAGGAA
GAAGCCATCG CCGAACTGGT GCAGCGCACG GCCCACATGG TCAGCGTGCG CCTGTCGGCC
GACGGACACC TGTAG
 
Protein sequence
MEQTSGRKAQ RAGARATKRE AGIAAEAASA AADAGRSPES SLSRLLATLG LFSTARPSLM 
ADEIAAELGV PQSTAYRYIQ ELTKVGLLVR LDRSITLGPR IIELDRCIRE SDPVIRAAVP
PMRELAEQTG LDVFLSKLYG HSIITVHTES HDPQPRLRYG RGRPVPVLQG ASSKALVAFL
PAARLRRLHQ ELAGESGDVP SWEVFYEMAQ RIRRDGYCRT SGELNEGRTG VSAPIFGRGR
LVVASVTALG SDARMALFKE EAIAELVQRT AHMVSVRLSA DGHL