| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3326 |
|---|
| Symbol | |
|---|
| ID | 4667320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3677583 |
|---|
| End bp | 3679796 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639824524 |
|---|
| Product | TonB-dependent receptor, plug |
|---|
| Protein accession | YP_971660 |
|---|
| Protein GI | 120611982 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.686308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTCT CTTCCGTCTC CGGGCCCCGC GCGTGGGCTG TCCTGCTGGG TGCCGTGCCC
GTGGCTGCCA TGGCGCAGTC GCCCGCTTCC GATTCGTCGC CCACCCAACT GCCGCCGGTG
GAGGTGCGCG AGCGCGCCGA AACGCCGCGC CTCGCGCAGC CTGCCGCCGC GGCCTCGCGC
CTGGGGCTGA CCGTGCGCGA GACGCCGGCC TCCATCGACG TGGTGCCGCG CGAGATGCTG
GCCGAGCGCG GGTCGCGCAC GGTGTCGGAG GCCGCGCAGG CGGCCGTGGG CGTGCTGGCG
GGGGATTTTC CTGCGGAGCC GGCTGCGTTC TCCATGCGCG GCTTCGCCAA CAGCCAGATC
AACACCCTCT ACAACGGCAT CAAGATAGGC CCGCCGAACA TGACCTCGCG CGTCATGGGC
ACGGCGAATC TCGAACGCGT GGAGTTCCTC AAGGGACCCG CGTCGCTGAT GTCGGGCGAG
GGCGCGGCCG GCGGCGCGGT GAACTTCGTC ACGCGCGCGC CGCACCGCGG CCCGGTGGAA
ACCGAGGTGA CCGCCGCGGC CGGATCCTTC GGCGAGCGGC GCCTGTCCGT CGGCACCGGC
GGCACCACGG CCCGGAAGGA CGTGGACTTC CGCCTCGACG CGAGCGGTTC GGACAATGAC
GGCTTCGTGC GGGACACGGG CCAGCGCCTG TGGCACCTGT CGGGCGGCCT GGACTGGTAC
CTGCGGCCGG GGCTCAAGCT GTTCGTCGCC GCTGAAGTGC AGCGCGACCG CGGCCATCCG
TACTGGGGCA CGCCGCTGGT CTCCGCGGCG GCGCCGGGCA TCCAGGCGCA GCCGGGCGTG
GTGTCCGGCA CCTATGTGTC GGGCTTCAAC GGCAGCGTGC TCGCACCGGT GGCCATCGAC
CGCCGCACGC TGCGCACGAA CTACAACGTG CTGGACAACC GCAACGAAGC GCGCGAGACC
TGGCTGCGCA CGGGCGTGGA CTGGCGCATC GACGCCGCGT GGACGCTGCG CAGCCAGCTC
TACCGCTACA CCGCCACGCG CTCGTGGCTG AACAACGAGG TGCTCGCGTT CAACACCGGC
ACCGGCCTGG TGGACCGCGA GCGTTTCTTC GTGGCGCAGG ACCAGACGAC CACAGGCAAC
AAGACCGAAC TGCAGTGGGA CGGTCGTCTG GCAGGCCGGG AAAACCGCTT CGTCGCCGCG
CTGGAACTGA GCGACACGGA CCTGGACCGC CCCGGCGCCG CCAACTTCCC CGGCGACAGC
GTGTCGCTGA TTTCACCCGA CCGCGGCTTC TACGGCCCGC TGGTGCAGCA GCGGCAGACC
ACGCGGTTGC GCAATGCGGC GGTCGCGCTG GAGGACCGGC TGCGCATCAC GCCCGCCGTG
GCCCTCATTG GAGGCCTGCG GCACGAATCC ATCGAACTCG ACCGCACCTC CACCGACGCG
GCGGGCGCGG CGCGCCGCGG CTTTCCCTAC GGCAAGACCT GGCACCCGAC CACCGGCCGG
CTGGGCCTGA CGTGGGAGCC CGCGGCGGGC ACCATGCTCT ACGCCCAGGC CGCGACGGGT
GCCGACGTGG CCGCCAACAA CATCTTCCTG CTCGGCCCCG GCCAGCCGCT GGAGCTCACC
CGGGCGCGCA ATGCCGAGGT GGGCGTCAAG CAGGGCTTCT GGCAGGACCG CGGCGAATGG
ACGCTGGCCC TCTACGATGC CGAGCGCCGC AACGTCTATG CGGGGCAGGG TGGCCAGTCG
CTGGCGCGCG CCGGCGCGCT GCGATCGCGT GGCGCGGAGC TGTCCCTGGC GCTGCGCCCC
GCGGCCGCCT GGAGCGTCTG GACGCAACTG GCCTTCAACC GTGCGCGCTA CGATGATTTC
GTGCTGGCCA ACGGTACATC CTTCTCCGGC CACACCCCGC CCAACACCCC GAAGGTGATG
GCCAGCGTCG GCGCGGCCTA CCGCTTCACC GCGGGCCTGC CGATGCAGAT CTCCGCTTCG
CTGCGGCACG TGGGCGAGCG CTTCCACAGC GACGCCAACA CGGTCCGCCT GTCGGCCTAC
CGCGTGATCG ATGCGGCCTG GAGCGTGGAC GTGGCCCCGG GCACCCAGCT CACCCTGCGG
GGCCGCAACC TGGCCAACAA GGTCTATGCC GCCTGGGCGG ATCCGTTCTA CCCGGACCAG
ATCCTGCTCG GCGCGCCGCG CAGTTTCGAG CTGGCCCTGC GCTGGACGCT CTGA
|
|---|
| Protein sequence | MPFSSVSGPR AWAVLLGAVP VAAMAQSPAS DSSPTQLPPV EVRERAETPR LAQPAAAASR
LGLTVRETPA SIDVVPREML AERGSRTVSE AAQAAVGVLA GDFPAEPAAF SMRGFANSQI
NTLYNGIKIG PPNMTSRVMG TANLERVEFL KGPASLMSGE GAAGGAVNFV TRAPHRGPVE
TEVTAAAGSF GERRLSVGTG GTTARKDVDF RLDASGSDND GFVRDTGQRL WHLSGGLDWY
LRPGLKLFVA AEVQRDRGHP YWGTPLVSAA APGIQAQPGV VSGTYVSGFN GSVLAPVAID
RRTLRTNYNV LDNRNEARET WLRTGVDWRI DAAWTLRSQL YRYTATRSWL NNEVLAFNTG
TGLVDRERFF VAQDQTTTGN KTELQWDGRL AGRENRFVAA LELSDTDLDR PGAANFPGDS
VSLISPDRGF YGPLVQQRQT TRLRNAAVAL EDRLRITPAV ALIGGLRHES IELDRTSTDA
AGAARRGFPY GKTWHPTTGR LGLTWEPAAG TMLYAQAATG ADVAANNIFL LGPGQPLELT
RARNAEVGVK QGFWQDRGEW TLALYDAERR NVYAGQGGQS LARAGALRSR GAELSLALRP
AAAWSVWTQL AFNRARYDDF VLANGTSFSG HTPPNTPKVM ASVGAAYRFT AGLPMQISAS
LRHVGERFHS DANTVRLSAY RVIDAAWSVD VAPGTQLTLR GRNLANKVYA AWADPFYPDQ
ILLGAPRSFE LALRWTL
|
|---|
| |