Gene Aave_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3287 
Symbol 
ID4668515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3634751 
End bp3635095 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content70% 
IMG OID639824485 
Producthypothetical protein 
Protein accessionYP_971621 
Protein GI120611943 
COG category[S] Function unknown 
COG ID[COG5416] Uncharacterized integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00585149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATT TCCTGTGGCT GCTCAAGGCA GCCATTTTTT TCACCCTCTT CGCCTTCGCG 
CTGAACAACC AGCAGGACGC GACGGTGCAT TTCTTCTTCG GCACCCGATG GACCGCGCCG
CTGGTGCTGG TGGTGCTGTC CGCCTTCGCC CTCGGTGTCG CCGTCGGCGT GCTGGGCATG
GTGCCCCGCT GGTGGAAGCA CCTGCGCGCC GCGCGCCGTG CCGAGGCCGC GCTGCCGCCC
TCGCCCGCCT CCGCGCCCGC CTCCGCGCCG GCGTCCACCG CCTCGGCGGG CAACCCCGCC
CCCGTCACCG ACCTGCAGCA GCAGCCGCCC ATCCATGGAA TTTGA
 
Protein sequence
MKYFLWLLKA AIFFTLFAFA LNNQQDATVH FFFGTRWTAP LVLVVLSAFA LGVAVGVLGM 
VPRWWKHLRA ARRAEAALPP SPASAPASAP ASTASAGNPA PVTDLQQQPP IHGI