| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3169 |
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| Symbol | |
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| ID | 4666139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3498266 |
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| End bp | 3498658 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824369 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_971506 |
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| Protein GI | 120611828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00329207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTCC TTCTTCCCCC CGGATGGCCC CGGCCCAAGG GTTACGCCAA CGGCGTCGCG
GCGCGCGGCC GCATGGTCTT CGTGGCCGGC ATGATCGGCT GGGACGCCCA GGGCGTGTTC
CACACCGACA CGCTGTGCGG CCAGGTGCGG CAGGCGCTGC AGAACATCGT CGAGGTGCTC
GCGGAAGGCG GCGCGCGCCC CGAGCACATC GTGCGCATGA CCTGGTACGT GACCGACAAG
AAGGACTACG TGGCCTCGCT GCGGCAGATC GGCCAGGACT TCCGCGAGAT CATCGGCAGC
TTCAACGCGG CGATGACGGC GGTGGAGGTC TCGGCGCTGA TCGAGGACCG TGCCAAGGTC
GAGATCGAAG TCACGGCCGT GGTGCCGGAC TGA
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| Protein sequence | MQVLLPPGWP RPKGYANGVA ARGRMVFVAG MIGWDAQGVF HTDTLCGQVR QALQNIVEVL
AEGGARPEHI VRMTWYVTDK KDYVASLRQI GQDFREIIGS FNAAMTAVEV SALIEDRAKV
EIEVTAVVPD
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