| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3102 |
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| Symbol | |
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| ID | 4665734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3426863 |
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| End bp | 3427465 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824301 |
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| Product | peptide deformylase |
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| Protein accession | YP_971440 |
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| Protein GI | 120611762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0798593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.280796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCGCG TCCCCCCCGA CCGGCGGCGA TCCGCGCCGC CGCCCACTTC GCGAGCTTTC
TACATGGCCA TCCACGACAT CCTCAAGATG GGCGACGAGC GTCTTCTGCG CACCGCCCGG
CCCGTCGCCG AATTCGGCAC GCCTTCGCTG CTGCAACTGG TGCAGGACAT GCGGGACACC
ATGCGCGCGG TGAACGGCGC GGGCCTCGCC GCGCCGCAGA TCGGGGTGGA CCTGCAGGTG
GTGATCTTCG GATCGGAGGA GCGCAATCCG CGCTACCCCG ACCGGCCGCT GGTGCCGCCC
ACGGTGCTGG TGAACCCGCG GATCACGCCG CTGGGCGGCG AGGAGGAGGA AGACTGGGAG
GGGTGCCTGT CCGTGCCGGG GCTGCGGGGC GTGGTGCCGC GCTGGTCACG CATCCACTAC
AGGGGCTTCG ACGAGCACGG CGCGCCGATC GACCGCACGG TGGAAGGCTT CCATGCCCGG
GTGGTGCAGC ACGAGTGCGA CCACCTAGTG GGCAAGCTGT ACCCGATGCG CATCCGCGAC
TTCTCGCGCT TCGGCTATGC GGACGTGCTG TTCCCGGACA TCGCGGAGCA CGAGGACGAC
TGA
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| Protein sequence | MLRVPPDRRR SAPPPTSRAF YMAIHDILKM GDERLLRTAR PVAEFGTPSL LQLVQDMRDT
MRAVNGAGLA APQIGVDLQV VIFGSEERNP RYPDRPLVPP TVLVNPRITP LGGEEEEDWE
GCLSVPGLRG VVPRWSRIHY RGFDEHGAPI DRTVEGFHAR VVQHECDHLV GKLYPMRIRD
FSRFGYADVL FPDIAEHEDD
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