| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3007 |
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| Symbol | |
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| ID | 4666335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3315168 |
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| End bp | 3317360 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639824209 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_971348 |
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| Protein GI | 120611670 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.796938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCC CCCATCCCCT CGCCCTCGCC GCATCCCTCG CCCTGCTCGG CACCCAGGCC
GGCGCCGCGC CCGCCGGCAC CGATGCCCCC TCGCTGCCGA CGGTGACCGT CGGCGCCAGC
GCCGATGCCT CCGCCCAGGG GCTCTCCCCG GCCTACCCGG GCGGGCAGGT GGCGCGCGGC
GGACGCGCCG GCATCCTGGG CACGAAGGAT GCGATGGACA CCCCCTTCAG CATCACCAGC
TACACCAATG AGCTGATCCA GGACAAGCAG GCAAAAAGCG TCGGCGAGGT GCTGCAGAAC
GACTCCGGCG TGCGCCTGGC CCGCGGTTTC GGCAACTTCC AGGAGGCGTA CTTCATCCGC
GGCTTCGTGC TCGGCTCCGA CGACACGGCC TACAACGGCC TCTACAGCCT GCTGCCGCGC
CAGTACATCG CCACCGAACT GTTCGAGCGC GTCGAAGTGC TGCGCGGCGC CTCCACCTTC
CTGTCGGGCG CCACGCCGTC GGGCGGCGGC ATCGGCGGCG CGGTCAACCT GCTGCCCAAG
CGAGCGCCCA ACGAGCCGCT GTCGCGCGTG ACGGTGGGCA CGGGATCGGG CGGCCGCATC
GAGACGGCGG TGGACATCGG CCGGCGCTTC GGGCCGGATG GCAGCACCGG CATCCGCTTC
AACGCCGCCT ACCAGGACGG CGACACCGCC GTGGACCATG AAAAAAGCCG GCTCGGCCTC
ATGGCCCTGG GCCTGGACTG GCGCAGCCGC GACGTGCGCC TGTCGGGCGA CATCGGCTGG
CAGGACCACC GCCTGAAGGG CACGCGGCCG AACGTCTCGC TGTCCGGCGC CACCGCCGTG
CCCGCCGCGC CGGATGCTGC CGCCAATTTC TCGCAGCCCT GGGCGTATTC CAACGAGCGC
GACGTGTTCG GCACGTTCCG CGGCGAGGTG GACCTGTCGC CCGGCATGAC GGCCTGGGGG
GCATGGGGCA TGCGCCGCGG CAAGGAAGCC AATTCGCTCG CCAACCTGAC GGTGGCCGAC
GCCGCCACGG GCGCGGGCAC GGCCTACCGC TTCGACAACA CCCGCAAGGA CCGCGTGGAC
ACCGGCGAAC TCGGCCTGCG CGGCAAGCTG CGCACCGGCG CGGTGGGCCA TGAATGGGTG
GCGGCCGTGT CGTATTTCGA GGCCGAGAAA GACAACGCGT ACGCGATGGA CTGGCGCAAC
ACCATCGCCT CCAACCTCTA CCAGTACCGG CCCACCGCGC AGCCTGCCTT CAGCGCCGCC
ACGCTGTATG GCGGCACGCT GTCGAGCCCC AACCTCACGG GCCGCACGCG GCTGCTGAGC
TACGCCCTGG GCGACACGCT CTCCTTCGTG GACGACACGG TGCTGCTCAC CCTGGGCCTG
CGCCACCAGC GGCTGGACAC GTCCGATTTC GCCTACGGCA CCTCCGCGCT GCTCGCGCGC
TACGAGCAGA GCCGCAACAG CCCCATGGCG GGACTCGTGT TCAAGATGGC GCCGCGGTGG
TCGCTCTACG GCAACTACAT CGAGAGCCTG AGCCAGGGCC AGACCGCGCC GGCCACGGCC
AACGGCGCGC CCGTGGCCAA CAGCGGCCAG CAGCTTGCAC CGTATGTCGC CAAGCAGAAG
GAAGTGGGCG TGAAGTACGA CGGCGGCCGC CTGCGCGGGT CGCTGGCACT GTTCAGCACC
ACCAAGCCCC GCGCCTATGT CGATGCCTCG AACGTGTTCG GCGCCTCCGG CAGGGACCGC
CACCAGGGCG TGGAACTGGA CGTGCAGGGC GAAGCCATGC GCGGCCTTCG CCTGCTGGGC
GGCGTGACCT GGCTGGACGC GAAGCAGCAG AGGACGGGCA GCGCAGCCAC CGACGGCAGG
CGCGTGATCG GCGTGCCGCG CCTGCAGGCC AATGCCGGCG TGGAGTGGGA CGTCCCCGGC
ATGCCCGGCC TGGCGCTCGA CACGCGCGCC GTCTATACCG GCGCGAGCTA TGCCGACGGC
GCCAACGCCC TGCGCGTGCC TGGCTGGACG CGCCTGGATC TGGGCGTGCG CTACGCCACG
GAATGGAGCG GCCGGCTCGT GACGCTGCGC GCCCGCGTGG ACAACGTGGC CGATCGCAAC
TACTGGGCCT CGTCCGGCGG GTACCCCGGT TCTGGCTACC TCGTGGTGGG CGCGCCGCGT
ACCTTCACGC TGAGCGCCAG CGTGGATTTC TGA
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| Protein sequence | MFRPHPLALA ASLALLGTQA GAAPAGTDAP SLPTVTVGAS ADASAQGLSP AYPGGQVARG
GRAGILGTKD AMDTPFSITS YTNELIQDKQ AKSVGEVLQN DSGVRLARGF GNFQEAYFIR
GFVLGSDDTA YNGLYSLLPR QYIATELFER VEVLRGASTF LSGATPSGGG IGGAVNLLPK
RAPNEPLSRV TVGTGSGGRI ETAVDIGRRF GPDGSTGIRF NAAYQDGDTA VDHEKSRLGL
MALGLDWRSR DVRLSGDIGW QDHRLKGTRP NVSLSGATAV PAAPDAAANF SQPWAYSNER
DVFGTFRGEV DLSPGMTAWG AWGMRRGKEA NSLANLTVAD AATGAGTAYR FDNTRKDRVD
TGELGLRGKL RTGAVGHEWV AAVSYFEAEK DNAYAMDWRN TIASNLYQYR PTAQPAFSAA
TLYGGTLSSP NLTGRTRLLS YALGDTLSFV DDTVLLTLGL RHQRLDTSDF AYGTSALLAR
YEQSRNSPMA GLVFKMAPRW SLYGNYIESL SQGQTAPATA NGAPVANSGQ QLAPYVAKQK
EVGVKYDGGR LRGSLALFST TKPRAYVDAS NVFGASGRDR HQGVELDVQG EAMRGLRLLG
GVTWLDAKQQ RTGSAATDGR RVIGVPRLQA NAGVEWDVPG MPGLALDTRA VYTGASYADG
ANALRVPGWT RLDLGVRYAT EWSGRLVTLR ARVDNVADRN YWASSGGYPG SGYLVVGAPR
TFTLSASVDF
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