Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2998 |
Symbol | |
ID | 4667367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3305979 |
End bp | 3306788 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639824200 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_971339 |
Protein GI | 120611661 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.186878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGTGA CCGTCAACGG CCACGCGGCC TATTGCTATA CGGGCAGCAA GCCCTTCGAC CCGGCACTGC CCACGGTGGT GATGGTGCAT GGCGTGCTCA ACGACCACAG CGTGTGGGGC TTCCAGAGCC GGCATCTCGC GCACCACGGC TGGAATGTGC TGGCGGTGGA CCTTCCGGGC CACGGCCGCA GCGGTGGGGA GGCGCCGCAG AGCGTGGAAG AGGCAGCGGA TTTCATCGTG GGCCTGCTGC GCGCGCTGGG CGTGGAGCGG GCGGCGCTCG TGGGCCACAG CTGGGGGTCG CTGATCGCGC TGGAGGCGGC CGCGCGGCTC GGCACCGCCG CGACGCACCT GGCGCTGGTG GGCACGGCCT ACCCGATGAA GGTGTCGCCC GCGCTCATCG AAACCTCGCT GAACGAACCC GAGAAGGCGC TGCGGATGGT GAACGTGTTC TCCCGCGGCA GCCTCGCGTC GCCCTCGGGC GCGGGCTTCT GGACCTTCGG CGCGGGCATG GCGCTCGGCC GCCGCGTGCT GCGCAGCAAT CCGCACGTGA ACGTGTTCCA CCGCGGATTC GTGGCCTGCG ACCGCTATGC GGGGGCAGAA GCTGCCATCG CCGCCCTCGC CTGCCCGGTG CTGTTCGCAC TGGGCGCGCA GGACCAGATG ACGCAGCCCC GCGCGGCCCA GGGCCTGATC GCGGCGGCGC GCGCGGCGGG GCGGGAGGTG CGGGTGGAGA TGCTGCCCGT GGGCCATTTC CAGATGACGG AGGCACCGGA GGAGACGCTG CGCGCGCTGC GCACCTTCCT GGGCGCCTGA
|
Protein sequence | MQVTVNGHAA YCYTGSKPFD PALPTVVMVH GVLNDHSVWG FQSRHLAHHG WNVLAVDLPG HGRSGGEAPQ SVEEAADFIV GLLRALGVER AALVGHSWGS LIALEAAARL GTAATHLALV GTAYPMKVSP ALIETSLNEP EKALRMVNVF SRGSLASPSG AGFWTFGAGM ALGRRVLRSN PHVNVFHRGF VACDRYAGAE AAIAALACPV LFALGAQDQM TQPRAAQGLI AAARAAGREV RVEMLPVGHF QMTEAPEETL RALRTFLGA
|
| |