Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2903 |
Symbol | |
ID | 4668297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3199621 |
End bp | 3200232 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639824103 |
Product | prophage LambdaSo, lysozyme, putative |
Protein accession | YP_971245 |
Protein GI | 120611567 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0188915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.371774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCCC GTTCACCCCG CCGCCGATTC GGCCGCATCT CCGGTCGCCA GCTCGTAGCG CTGCTGACGC TGTCCGGCGC TGGCCTGGTC AGCATCGTCA CGCACGAAAG CTACACCGAA AAAGCCATCG TCCCCACGCA GGGCGATCGG CCCACCGTGG GGTTCGGAAG CACGTTCCAC GAAGACGGCT CTCCCGTGAA GCCGGGCGAC ACCACCACGC CCGTGCGCGC CCTCATCAAG GCGCAGGCGC ACATCAGCCG CGACGAGCAG GCCTTCCGCG CATCGTTGCC CGACGTGGCG CTGTACCAAG CCGAATACGA CGTCTACATG GACTGGGTCT ACCAATACGG CTCCGCGGCG TGGCGCGCGT CGGGCATGCG CCGCGAGCTG CTCGCCGGCA ACTACGTGCA GGCATGCGAC GAGCTGCTCG CCTACCGCAA GCTCACCAGC GCTCGAAAAG AAGGCCCCGG GTGGGTCGTG AGCAGGCAGG ACGCGCAGGG CCGTCCGCTG CGCTGGGAAT TCGACTGCTC GACGCCCGGC AACCGGGTGT GCCGCGGAGT GTGGACGCGC CAGCTCGAGC GCCACAAGAA GTGCATGGAG GCGCAGCAAT GA
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Protein sequence | MHSRSPRRRF GRISGRQLVA LLTLSGAGLV SIVTHESYTE KAIVPTQGDR PTVGFGSTFH EDGSPVKPGD TTTPVRALIK AQAHISRDEQ AFRASLPDVA LYQAEYDVYM DWVYQYGSAA WRASGMRREL LAGNYVQACD ELLAYRKLTS ARKEGPGWVV SRQDAQGRPL RWEFDCSTPG NRVCRGVWTR QLERHKKCME AQQ
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