| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2667 |
|---|
| Symbol | |
|---|
| ID | 4666765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2926844 |
|---|
| End bp | 2928229 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639823870 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_971013 |
|---|
| Protein GI | 120611335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00943283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.323066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTGC ACGCATCCCC TCGATCCCTC CCCGCTTTCC GCCAGCCGCC CGCCGGCTGG
AAGCCCGTCC TGGCGGCCGT GCTGGCGCTC GGCGCGCTCG CCGCCGGCCC GGCCTCCGCC
CAGGCCACCG CACCGCAGCC CGGCGCCAGC CCGGCCGTGC AGCGTGCGCT GCAGGCCGTG
CGTTCGGCCC CCGCCGTGCA GCAGGTACTG GACGGCGTGC GCGCAGACCA TGACCGCGCC
ATCGCCGAAC TGCGCCAGTT GGTACAGATT CCCGCGCCGC CCTTCAAGGA ACAGCGCCGC
GCCGAATACG TGGTGAAGCG TTTCCAGGAA CTGGGCCTGG CCGATGCCGC CATCGACCGG
GAAGGCAATG CCGTGGGCAT CCGCAAGGGC ACGGGCAACG GCCCCAGGCT GGTGGTGTCG
GCGCACCTCG ATACCGTGTT CCCCGAGGGC ACCGACCTCA CCGTGCGCGA GGAAGGCGGC
CGGCTGTACG CCCCCGGCAT TTCGGACGAC ACGCGCGGCG TCACGGTGCT GCTCTCCTGG
CTCAAGGCGC TCAACGAACG CCAGCTGCAG ACGGTGGGCG ACATCGTCTT CGTGGCGAAT
GTGGGCGAGG AGGAACTGGG CAACCTGCGC GGCATGAAGG CCCTGTTCCG CGAGCATGCG
GACATCGACG GCATGGTCGG CCTGGAGCCC GGCGAGGGCG ACGGCATCCT CAACCAGGGC
ACGGGCAGCC ACCGCTACGA AGTCGCTTTC AAGGGGCCGG GCGGCCACAG CTTCGCGGCC
TTCGGACAGG TGCCGAGCGC GATCCATGCG ATGGGCCGCG CGATCGCGCA CATCGGCGAC
GTGCAGGTGC CGGCCGATCC CAAGACCACC TTCACCGTGG GCAAGGTGGG CGGCGGCACC
TCCGTGAACA CCATCGCGGG CGACGCCACG ATGGCCGTGG ACATCCGCTC CAACGCCCTG
CCCGCGCTGC TGCAGGCGGA AAAAGACATC ATGGCCGCCA TCCAGCGCGG CGTTCAGGAA
GAAAACCGCC GCTGGAACAC CGCCGCACGG ATCACGGCCG AGCCGAAGAT GATCGGCGAC
CGCCCGGCGG GCGCCACCGC CGCCGGCGAG CCCATCGTGC AGGCCGCCGT GGCCTCGGTC
ATCGCCTCGG GCGGCAAGCC CACGCTGCGC GCGGCCAGCA CCGACGCCAA CGTGCCCATG
GGGCTGGGCA TCCCCGCCAT CATCCTGGGC AGCGGCGGCA AGACCGGCGG CTTCCACGCG
CTGGGCGAGT GGTTCGACCC GGCCGATGCC TGGAAGGGCG CGCAGACCGG GCTCGCCACG
GTACTGACAC TGGTGGGCGT GCAGGGCGTG AGCGAGCCGG TCCTGGCACG CCGCCCGCGC
CGCTGA
|
|---|
| Protein sequence | MPLHASPRSL PAFRQPPAGW KPVLAAVLAL GALAAGPASA QATAPQPGAS PAVQRALQAV
RSAPAVQQVL DGVRADHDRA IAELRQLVQI PAPPFKEQRR AEYVVKRFQE LGLADAAIDR
EGNAVGIRKG TGNGPRLVVS AHLDTVFPEG TDLTVREEGG RLYAPGISDD TRGVTVLLSW
LKALNERQLQ TVGDIVFVAN VGEEELGNLR GMKALFREHA DIDGMVGLEP GEGDGILNQG
TGSHRYEVAF KGPGGHSFAA FGQVPSAIHA MGRAIAHIGD VQVPADPKTT FTVGKVGGGT
SVNTIAGDAT MAVDIRSNAL PALLQAEKDI MAAIQRGVQE ENRRWNTAAR ITAEPKMIGD
RPAGATAAGE PIVQAAVASV IASGGKPTLR AASTDANVPM GLGIPAIILG SGGKTGGFHA
LGEWFDPADA WKGAQTGLAT VLTLVGVQGV SEPVLARRPR R
|
|---|
| |