| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2638 |
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| Symbol | rho |
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| ID | 4665462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2895118 |
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| End bp | 2896380 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639823841 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_970984 |
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| Protein GI | 120611306 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.105772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00838522 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCTAA ACGAACTCAA GGCACTGCAC GTGTCCGAAG TGCTCAAGCA GGCCGAAGAG
CTGGAGATCG AAAACACCGG TCGCATGCGC AAGCAGGAAC TGATGTTCGC GATCATCAAG
AAGCGCGCGA AGGCGGGCGA GCAGGTCTTC GCCGACGGCG TGCTGGAGAT CCTGCCCGAC
GGCTTCGGCT TCCTGCGCAG CCCGGACACG AGCTACACCG CGAGCACGGA CGACATCTAC
ATCTCCCCCA GCCAGGTGCG CCGCTTCAAC CTGCACACGG GCGACATGAT CGAGGGCGAG
GTCCGCACGC CGAAGGACGG CGAGCGCTAC TTCGCGCTGA CCAAGCTCGA CGCCGTGAAC
GGCGGCCCGC CGGAGCAGAA CAAGCACAAG GTCATGTTCG AGAACCTGAC CCCGCTGTTC
CCCAAGGAGC AGATGAAGCT CGAGCGCGAC ATGAAGGGCG ACGAGAACAT CACGGGCCGG
ATCATCGACA TCATCGCCCC CATCGGCCGT GGCCAGCGCG CGCTGATCGT CGCGCCGCCC
AAGAGCGGCA AGACGATGAT GATGCAGCAC ATCGCCCACG CCATCACGGC CAACAACCCC
GACGTGCACC TCATGGTGCT GCTGGTGGAC GAGCGCCCCG AAGAAGTGAC CGAGATGCAG
CGCACGGTCA AGGGCGAGAT CATCGCCTCC ACCTTCGACG AGCCCGCCGC CCGCCACGTG
CACGTGGCCG AGATGGTGAT CGAGCGCGCC AAGCGCCTCG TGGAACTGAA GAAGGACGTG
GTGATCCTGC TGGACTCCAT CACCCGCCTC GCCCGCGCCT ACAACAACGT CGTGCCCTCC
TCCGGCAAGG TGCTGTCCGG CGGTGTGGAT TCCAACGCGC TGCAGCGCCC CAAGCGCTTC
TTCGGCGCCG CGCGCAAGGT GGAAGAAGGC GGCTCGCTCA CCATCATCGC CACGGCCCTG
GTGGACACCG GCAGCCGCAT GGACGAAGTG ATCTTCGAAG AGTTCAAGGG CACCGGCAAC
AGCGAAATCC ACCTGAACCG CCGCCTCTAC GAGAAGCGCG TGTTCCCGGC CATCGAGCTC
AACAAGAGCG GCACGCGCCG CGAAGAGCTG CTGCTGCCCC CGGAAATCCT GCAGAAGACC
CGCATCCTGC GCCAGTTCCT CTACAACATG GACGAGATCG AAAGCATGGA GCTGATGATC
AAGAACATGA AGGCCACCAA GACCAACGTC GATTTCTTCG ACATGATGCG CCGCGGCGGC
TGA
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| Protein sequence | MHLNELKALH VSEVLKQAEE LEIENTGRMR KQELMFAIIK KRAKAGEQVF ADGVLEILPD
GFGFLRSPDT SYTASTDDIY ISPSQVRRFN LHTGDMIEGE VRTPKDGERY FALTKLDAVN
GGPPEQNKHK VMFENLTPLF PKEQMKLERD MKGDENITGR IIDIIAPIGR GQRALIVAPP
KSGKTMMMQH IAHAITANNP DVHLMVLLVD ERPEEVTEMQ RTVKGEIIAS TFDEPAARHV
HVAEMVIERA KRLVELKKDV VILLDSITRL ARAYNNVVPS SGKVLSGGVD SNALQRPKRF
FGAARKVEEG GSLTIIATAL VDTGSRMDEV IFEEFKGTGN SEIHLNRRLY EKRVFPAIEL
NKSGTRREEL LLPPEILQKT RILRQFLYNM DEIESMELMI KNMKATKTNV DFFDMMRRGG
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