| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2564 |
|---|
| Symbol | lpxK |
|---|
| ID | 4666621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2815448 |
|---|
| End bp | 2816491 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639823768 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_970911 |
|---|
| Protein GI | 120611233 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0664726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00223981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC CACGCCGCCG CGGACGATCC GCGCCGGACG CGACGCCGGG GATCCAGCGG
GTGTGGCGCC ACCGCGGCGC GATGGCCTGG CTGCTGTCGC CCATCTCCCT CCTCTACGGC
GCCCTGGCCG GTTTGCGGCG GCTGCTCTAT GTCCGGGGAG TATTGCGGGT GGAGCGCCTG
CCCGTTCCCG TGGTCGTCGT GGGCAACGTA GTGGCCGGCG GCGCCGGCAA GACCCCCGTG
ACCCTGGCCG TCGTGCAGGC GCTGCGGCGG CATGGATGGC ACCCGGGCGT GGTGTCCCGC
GGGTACGGGC GCGGCACCTC CGACTGCCGC GAGGTGCTGG CGGGCAGCAG CGCCGCCGAG
TCCGGAGACG AGCCCCTGCT GATCGCGCGG TCCACCGGCG TGCCGGTGTT CGTCGCGCCA
CGGCGCGCGC AGGCGGCCCG CGCCCTGCTG GAGCGGCATC CGCGGACCGA CGTGGTCGTC
TGCGACGACG GTCTGCAGCA CTGGGCGCTG GCCCGGGATG TGGAGCTGTG CGTATTCAGC
GAGGAAGGCA TCGGCAACGG ATGGCTGCTG CCGGCCGGCC CGCTGCGCGA GCGCTGGCCG
CGGCACGTGG ATGCCGTGCT GCACGCCGGA GCCGCCCCTG AAGGCGCGGA CCGCGCCCCC
ATGGGGGCGT TCGCCCTGCG GAGGTCGCTC GCGTCCCATG CGGTGGATGC CACCGGAAGC
ACCACGGCAC TTTCGTGCCT GCGCGGTCGG CCCGTGCATG CCGTGGCCGC GATTGCCCGG
CCCGCCGCCT TTTTCGCCAT GCTGCGTGCC GAAGGGCTCA CGCTGGCGAA GGAAACCGCC
CTGCCCGACC ATGCGGACTT CTCGGACTGG GCCCCCGTCA CGGATCCGGG CATGCCGCTG
GTATGCACCG AAAAGGATGC CGCCAAACTC TGGCGGACCC ATCCCCAGGC GCTGGCGGTG
CCGCTCGTGG TGGACATCCC TGCCGCTTTC TTCGACCGGC TGCACGCGCG ACTGCAGGCG
CTGCCGCGCC GGCGCTCGCT ATGA
|
|---|
| Protein sequence | MAQPRRRGRS APDATPGIQR VWRHRGAMAW LLSPISLLYG ALAGLRRLLY VRGVLRVERL
PVPVVVVGNV VAGGAGKTPV TLAVVQALRR HGWHPGVVSR GYGRGTSDCR EVLAGSSAAE
SGDEPLLIAR STGVPVFVAP RRAQAARALL ERHPRTDVVV CDDGLQHWAL ARDVELCVFS
EEGIGNGWLL PAGPLRERWP RHVDAVLHAG AAPEGADRAP MGAFALRRSL ASHAVDATGS
TTALSCLRGR PVHAVAAIAR PAAFFAMLRA EGLTLAKETA LPDHADFSDW APVTDPGMPL
VCTEKDAAKL WRTHPQALAV PLVVDIPAAF FDRLHARLQA LPRRRSL
|
|---|
| |