Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2407 |
Symbol | |
ID | 4665968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2627599 |
End bp | 2628861 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639823610 |
Product | replication initiation factor |
Protein accession | YP_970756 |
Protein GI | 120611078 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2946] Putative phage replication protein RstA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.29742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCACC CAGTTGGTAC AAATGTGAAC AAGCATGCAA AAGGCCATGC TGGTGCATGT AGCTTGGTCC TCGATGGAAA TCAGGTCAAA GCTCGGTTGA TTGCAGAGCG CATTGAAAGC GGCGTCCCTG TCCATGTGGA TTGGGTCCGT TTCACGGTCA ACCTTCGCAA TGCACCTATG CCATCGGTAG ACGTGCTTTT TCCCGAAGAG GACGTGGAGC CGTTGAGCGT TTGGGACCGT GATGAGCGCA CTGTCCGTAT CCAGCGCTTG CGCAAGGTTT TGCGCTTCAT TCCCGATGTG GATTTTTCGC CCAGCGTGCA GGCGTTTGAG CTTGCTGAGC GCGTTGCTGA GTGCCTTGGC GGTGATTTCG TCGTCCATCC GGAGGTTCGC AAAGGCCATG ATTTCTATCG CTGCCGGTGG TCGATTGAGC GCAATGGCGC CGAAGTCGGA TGGGTTGGAT TCCTCGCGTC CGGCGATGGT CCTCGCCAAC AGGCACAGGC GAAAACGATT CACTGCAACG TCTACGGGTC AGCCTGTACG TTCGCCAGAA GCGGATGGCG TGATCACCTC GCTAACGTGG TTGATGAGGC AAAGGGCTGG CTGACGCGCA TTGATTTGGC CCTCGATTTT TTCGACGGAT TGAACGGTGG CATGGAGCGC GTCAAGGCGG ACTATGAAGC GGGCTTGTGC GACGTCGGGG GGCGTCGTCT CAAGTGCAAC ATGGTCGGCG ACTGGTGCGG CGGCAAGGCC CGTTCGTTCT ATGTCGGCAC CAAAGAGGTC GGCAAGCAGA CCAACGTGTA CGAAAAGGGT CATCAGCTCT TTGGCGATGC AGATACATCT GCCTGGATAC GCGCCGAACT ACGGTGGGGC AATAAGGCCC GGTTCCTGCC TACCGACATG CTGCGCCGTC CGGCCGATTT CTTCCATGGT GCCAGCGACT GGCATGCGTC CCTTCTCAGG GAGGCGGAAG CAATTTCGTT CCCGGAGACA GTTTCCTGTG AAGCGAAGCG GCAGATTGAA ACCGTGGAAG GTGAAGCAGT GCGCAATGTG CGCTGGCTCC GTGAAGTGGC TGCGCCGAGT CTCGCCCTTG CATTCCAGCA CCTCGATTTC GAGCATTTCC TCGAACTCGT GTGCAACAAA AAGGCCCCTG GCCGTCTGCA GAAATTCAGC GAAGCGGAGA TTGCGCGCGC CTATGACCGC GCGTTCCTGC GGTCCTCAAC CAAAAACCCA AAGAGCGCGG ACGTTGGCCA CGTCTTGGCA TAG
|
Protein sequence | MTHPVGTNVN KHAKGHAGAC SLVLDGNQVK ARLIAERIES GVPVHVDWVR FTVNLRNAPM PSVDVLFPEE DVEPLSVWDR DERTVRIQRL RKVLRFIPDV DFSPSVQAFE LAERVAECLG GDFVVHPEVR KGHDFYRCRW SIERNGAEVG WVGFLASGDG PRQQAQAKTI HCNVYGSACT FARSGWRDHL ANVVDEAKGW LTRIDLALDF FDGLNGGMER VKADYEAGLC DVGGRRLKCN MVGDWCGGKA RSFYVGTKEV GKQTNVYEKG HQLFGDADTS AWIRAELRWG NKARFLPTDM LRRPADFFHG ASDWHASLLR EAEAISFPET VSCEAKRQIE TVEGEAVRNV RWLREVAAPS LALAFQHLDF EHFLELVCNK KAPGRLQKFS EAEIARAYDR AFLRSSTKNP KSADVGHVLA
|
| |