| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2275 |
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| Symbol | |
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| ID | 4665696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2505123 |
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| End bp | 2505575 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639823480 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_970627 |
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| Protein GI | 120610949 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.321934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000264043 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTTCTC ACGCATCTGC CGCGGCTTCC GCCACTGTCT CCCGTCCCGT GCTGTCGTTC
GCCAACCCTC CGGGGCTCCA TGATCCCGCC CCGAATGGCT ATTCCCACCT GGCCGTCGTG
CAGGGGCCGG TCCGCACCGT CCACGTGGCC GGCCAGGGCG GGGAGGATGC CGCTGGCCGG
CTGGCCGGAG GATTCGATGC CCAGGTACGC CAGGCGCTGG CCAATCTGTG CACGGCGCTG
GCCGCAGCGG GCGCCGCGCC GAGCGACGTC GCCCGCCTTA CCGTGCTGGT GGTGGACCAC
TCCGAAGAGC GGCTGCGGTC CTTCGGCGCC GCGCTGCGAG CGTGCTGGGG CGCGGCCGCC
CTGCCGGCCT GCACGCTGAT TCCGGTGCCG CGCCTCGCGC TCGACGGCAT GCTGTTCGAG
ATCGACGCCA CGGCGGTGCT GCCGGCGGCG TGA
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| Protein sequence | MISHASAAAS ATVSRPVLSF ANPPGLHDPA PNGYSHLAVV QGPVRTVHVA GQGGEDAAGR
LAGGFDAQVR QALANLCTAL AAAGAAPSDV ARLTVLVVDH SEERLRSFGA ALRACWGAAA
LPACTLIPVP RLALDGMLFE IDATAVLPAA
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