Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2190 |
Symbol | |
ID | 4668387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2408760 |
End bp | 2410400 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639823395 |
Product | ABC transporter-related protein |
Protein accession | YP_970542 |
Protein GI | 120610864 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGCAT CCGTTACCGT GCAGGACCTG CACATCACCG CGGGCAGCCA GACGCTGGTG GACCGCGTGA GCTTCTCGAT CGAGCCGGGC GAGGTGCTCG CGCTCATCGG CGAATCCGGC TCGGGCAAGA CCACCACGGC GCTGGCCCTC ATGGGCCATG CGCGCGAGGG CTGCAGCATC TCCGGCGGCA GCGTGCGCAT CGGCGACGTG GACGTGCTGG GGCTTTCAGC GGCCCGCCAG CGCGCGCTGC GGGGCCGCAC CGTGGCCTAC ATCGCGCAGA GCGCCGCCGC CTCGTTCAAC CCGTCGCGCA CCCTCATGGA CCAGGTGGTG GAGCCCGCGC GCATCCACGG CACCCTGCCG CGCGCCGAGG CCGAGGCGAA GGCCGTGCAG CTCTTCCGCG AGCTGGCGCT GCCCGATCCC GACACCATCG GCAGCCGCTA TCCGCACCAG GTGTCCGGAG GCCAGCTGCA GCGCATCATG GCCGCCATGG CGCTCATCAC CGACCCGGAC CTGGTCATCC TCGACGAGCC CACCACGGCG CTCGACGTGA CCACGCAGAT CGAGGTGCTG CGCGCCTTCC GCCGCGTGGT ACGCGAGCGG CGCGCCACGG CCGTGTACGT CAGCCACGAC CTGGCCGTTG TTGCGCAGAT GGCCGACCAC ATCCTGGTGC TGCGCGGCGG GCAGATGCAG GAGCTGAATT CCACGCCGCG CATCCTGGAG GCGCCGGAGC ACCCCTACAC CCGCAGCCTG CTGGCCGCGG CGCGCCCCGC GGCGCGCGAG GGCGGGGCGG GCGACGAAGG CGCCGTGCTG CTCGACGTGC GCCACCTGTC GGCCGGCTAC GGCCCGAAGG ATGCGCAGGG CCGTCCGGCC GCGCTGATCC TGGATGACGT GAGCCTCACC GTGCGCCGCG GCCAAGCCAT CGGCGTGATC GGCGAATCCG GCTCGGGCAA GACCACGCTC GCGCGCACCA TCGCCGGCCT GATTCCAGCG CATGCCGGCT CCGTGGTGTT CAACGGCAGG GAACTCAAGC CCACGCTCGC GCAACGCGAG CGCGAGGAAC TGCGCCGCAT CCAGATCGTG TTCCAGATGG CGGATACGGC GCTGAACCCG TCTCACACCA TCGGCCGCAT CCTGGCGCGG CCGCTGGAGT TCTACAAGGG CCTGCGCGGG CCGGCGCTGC AGCAGCGCAT CCGCCAGCTG CTGGACATCG TCAAGCTGCC CCACGCCGTG GCGGACCGCC TGCCCGGCGG CCTCTCGGGC GGGCAGAAGC AGCGCGTCAA CCTCGCCCGC GCGCTCGCGG CCGATCCGGA CCTGATCCTT TGCGACGAAG TCACATCGGC CCTCGACACC GTGGTGGGTG CCGCGGTGCT CGACCTGATG GCGGAACTGC GCCGGGAACT GGGCGTTTCC TATCTCTTCA TCAGCCACGA CCTGCACACG GTGCGCGCGG TGTGCGACGA GATCGTCGTC ATGCAGCACG GCCGCAAGCT GGACCAGGTG GCGCGCGCGA ATTTCGACCG CGGTCCCCAC CACCCGTACT TCGAGCTGCT CGCGCGCTCC GTGCCCGAAC TGCGCCAGGG CTGGCTGGAG GAGCAGGACA GGGCGGTCCC GGGCCGCACC CATGCGGCTC AGGCTGCATA A
|
Protein sequence | MGASVTVQDL HITAGSQTLV DRVSFSIEPG EVLALIGESG SGKTTTALAL MGHAREGCSI SGGSVRIGDV DVLGLSAARQ RALRGRTVAY IAQSAAASFN PSRTLMDQVV EPARIHGTLP RAEAEAKAVQ LFRELALPDP DTIGSRYPHQ VSGGQLQRIM AAMALITDPD LVILDEPTTA LDVTTQIEVL RAFRRVVRER RATAVYVSHD LAVVAQMADH ILVLRGGQMQ ELNSTPRILE APEHPYTRSL LAAARPAARE GGAGDEGAVL LDVRHLSAGY GPKDAQGRPA ALILDDVSLT VRRGQAIGVI GESGSGKTTL ARTIAGLIPA HAGSVVFNGR ELKPTLAQRE REELRRIQIV FQMADTALNP SHTIGRILAR PLEFYKGLRG PALQQRIRQL LDIVKLPHAV ADRLPGGLSG GQKQRVNLAR ALAADPDLIL CDEVTSALDT VVGAAVLDLM AELRRELGVS YLFISHDLHT VRAVCDEIVV MQHGRKLDQV ARANFDRGPH HPYFELLARS VPELRQGWLE EQDRAVPGRT HAAQAA
|
| |