| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2098 |
|---|
| Symbol | |
|---|
| ID | 4665402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2298747 |
|---|
| End bp | 2299871 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639823306 |
|---|
| Product | sterol desaturase |
|---|
| Protein accession | YP_970453 |
|---|
| Protein GI | 120610775 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.520582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.627756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACA AACTCAACGA CTTCACCGCC AGCCACGGCG AATTGCGTCC GGGCCGAGGC
CACATCTCCG GCGTCATCGC GCTCTCGCTC GGCATCCTGA GCTTCCTGGG CGTGCTCGCC
TTCCACTTCC CCGAATACCT CACCACGCCG CAGCTGCGCA AGGCCTACAA CGTCGATGTG
CTGCGCATGG TGCTGTTCGC AGCGCTCGTG GTGGCCGGCG GGCTCTCGCT CGTCAACATC
GTGTTCAACC GCTCGCGCTG GCTCTCGTCG GCGGCCTTCC TGCTCGTGAC CTCGGCCGCG
CTGCTCGGCG GCCACAAGGT GCCCGTGCAC GACTTTGCGG ACAACACGCC CTACATCGGC
CTGGACTGGT TCATCCTCGA TCTGCTGGGC AGCGCGCTGA TCTTCATCTT CATCGAGAAG
CTCTTCGCCC TGCGGCGCGA CCAGCCCATC TTCCGCCCCG AGTGGCAGTG CGATTTCCAC
CATTTCATCG TGAACCACAT GGTGGTGGGT TTCGTGCTGC TGGCGACCAA CCTGCTGGTG
CACAAGCTGT TCGGGTGGGC CGCCAGCGAC GGCATCCGCG GCTGGGTGCA GGGCCTGAAC
TTCTGGGTGG CGCTCTTCCT GATCATCCTG GTGGCCGACC TCGTGCAGTA CTGGACGCAC
CGCGCCTACC ACGAGGTGCC CGTGCTCTGG CGCCTGCACG CCGTGCACCA CAGCGTCAAG
AGCATGGACT GGATGGCGGG CTCGCGCCAG CACATCCTGG AACTGCTCAT CACCCGCACG
CTGGTACTGG CCCCCATCTA CGTGCTGGGT TTCTCGAAGG AGGTGATCGA TGCCTACATC
GTCATCGTCG GCTTCCAGGC GGTGTTCAAC CATGCCAACG TGAGCGTGCG CCTCGGCCCG
CTGCGCTACG TGCTCGTCAC GCCCAACTTC CACCACTGGC ACCACAGCCA GGACCAGGAA
GCGCTGGACC GCAACTACGC CGCGCATTTC GCCTTCCTCG ACTACCTCTT CGGCACCGCG
GTCCGGAGCG ACCGCCTGTG GCCCGAGAAG TACGGCGTGC TGGGCGACTA CGTGCCCAAC
GGATTCATCC AGCAGCTGAA GTTCCCGTTC ACCTGGAAAG GCTGA
|
|---|
| Protein sequence | MLDKLNDFTA SHGELRPGRG HISGVIALSL GILSFLGVLA FHFPEYLTTP QLRKAYNVDV
LRMVLFAALV VAGGLSLVNI VFNRSRWLSS AAFLLVTSAA LLGGHKVPVH DFADNTPYIG
LDWFILDLLG SALIFIFIEK LFALRRDQPI FRPEWQCDFH HFIVNHMVVG FVLLATNLLV
HKLFGWAASD GIRGWVQGLN FWVALFLIIL VADLVQYWTH RAYHEVPVLW RLHAVHHSVK
SMDWMAGSRQ HILELLITRT LVLAPIYVLG FSKEVIDAYI VIVGFQAVFN HANVSVRLGP
LRYVLVTPNF HHWHHSQDQE ALDRNYAAHF AFLDYLFGTA VRSDRLWPEK YGVLGDYVPN
GFIQQLKFPF TWKG
|
|---|
| |