Gene Aave_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2078 
Symbol 
ID4669907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2279596 
End bp2280258 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID639823287 
Producthypothetical protein 
Protein accessionYP_970434 
Protein GI120610756 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.746992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.850584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA AACCCAAAAA AGGCTATTTC GTGAAGGGCC ATTTCGTCGC CGAAGGCAGC 
GAACTGGACC TGCAGCTCAA GGCCGAGCTC AAAGGCACGA CCGAAGCCAG CCGCACCGAC
CTCAAGCGCG AGAGCGACGC GCTGCAGCAG CTCGGCCAGG ACCTGCTGAC GCTGCGCAGC
GACCTGCAGG CGCGCCTGCA GTTGCCCGAC AAGCTGCAGG ACGCGCTGGC CGAGGCGCGG
CGCATCACCA ACTTCGAGGG CAAGCGCCGG CAGATGCAGT ACGTGGGCAA GCTGATGCGC
CAGCTCGATC CCTCGATGGT GGTGGCTGCG CGCGCCGCGC TGGACGAGCA GCACAACGGC
TCGGCCACGG AAAAGCTCGC GCTGCACGAA GCCGAGCAGT GGCGAGAGCG CCTGATCGCC
GACGACAGCG CCCTGCCGCT CTGGATGGAG CGCTTCCCGC GCACCGACAC CCAGCAACTG
CGTGCGCTGA TCCGGCAGGC CCGCAAGGAC GCGCCGGAGG GCAAGGAAGC CAACGTACAG
GCGTCCCAGG GCCTCGCGCC GCGCAAGGGA CGCGCCTACC GGGAGCTGTT CCAGCTGGTG
CGCACGCAGA TGGACGAAGC CGCCCTGCAT GCCCGCCACG AAGAAGCCGA ACGCGATGCA
TGA
 
Protein sequence
MSRKPKKGYF VKGHFVAEGS ELDLQLKAEL KGTTEASRTD LKRESDALQQ LGQDLLTLRS 
DLQARLQLPD KLQDALAEAR RITNFEGKRR QMQYVGKLMR QLDPSMVVAA RAALDEQHNG
SATEKLALHE AEQWRERLIA DDSALPLWME RFPRTDTQQL RALIRQARKD APEGKEANVQ
ASQGLAPRKG RAYRELFQLV RTQMDEAALH ARHEEAERDA