Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2078 |
Symbol | |
ID | 4669907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2279596 |
End bp | 2280258 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823287 |
Product | hypothetical protein |
Protein accession | YP_970434 |
Protein GI | 120610756 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.746992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.850584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCA AACCCAAAAA AGGCTATTTC GTGAAGGGCC ATTTCGTCGC CGAAGGCAGC GAACTGGACC TGCAGCTCAA GGCCGAGCTC AAAGGCACGA CCGAAGCCAG CCGCACCGAC CTCAAGCGCG AGAGCGACGC GCTGCAGCAG CTCGGCCAGG ACCTGCTGAC GCTGCGCAGC GACCTGCAGG CGCGCCTGCA GTTGCCCGAC AAGCTGCAGG ACGCGCTGGC CGAGGCGCGG CGCATCACCA ACTTCGAGGG CAAGCGCCGG CAGATGCAGT ACGTGGGCAA GCTGATGCGC CAGCTCGATC CCTCGATGGT GGTGGCTGCG CGCGCCGCGC TGGACGAGCA GCACAACGGC TCGGCCACGG AAAAGCTCGC GCTGCACGAA GCCGAGCAGT GGCGAGAGCG CCTGATCGCC GACGACAGCG CCCTGCCGCT CTGGATGGAG CGCTTCCCGC GCACCGACAC CCAGCAACTG CGTGCGCTGA TCCGGCAGGC CCGCAAGGAC GCGCCGGAGG GCAAGGAAGC CAACGTACAG GCGTCCCAGG GCCTCGCGCC GCGCAAGGGA CGCGCCTACC GGGAGCTGTT CCAGCTGGTG CGCACGCAGA TGGACGAAGC CGCCCTGCAT GCCCGCCACG AAGAAGCCGA ACGCGATGCA TGA
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Protein sequence | MSRKPKKGYF VKGHFVAEGS ELDLQLKAEL KGTTEASRTD LKRESDALQQ LGQDLLTLRS DLQARLQLPD KLQDALAEAR RITNFEGKRR QMQYVGKLMR QLDPSMVVAA RAALDEQHNG SATEKLALHE AEQWRERLIA DDSALPLWME RFPRTDTQQL RALIRQARKD APEGKEANVQ ASQGLAPRKG RAYRELFQLV RTQMDEAALH ARHEEAERDA
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