| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2049 |
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| Symbol | |
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| ID | 4666380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2237201 |
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| End bp | 2242513 |
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| Gene Length | 5313 bp |
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| Protein Length | 1770 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639823259 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_970406 |
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| Protein GI | 120610728 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA AACCCGCAGC CCGGCAGGGC GACTTGACAA AAAAAGGCGG CCCGATCGTC
CAGGGCTCGG CGACGGTGCT GATCGGCTCG GCGGGAGGCG TGGCGTGCTC GGTGTGCCCC
GGGGGCATGG CGGTGGGCAA CCCGGTGAAC CCGGCGCTGG GCGCGAAGGT GCTCACGGGG
GGCGATGAAC TGGACTTCGC GCTGCCCGGG CCATTGCCGC TGGCGTGGCA GCGGGTGTAC
AGCAGCTATG TGAACGCGGA GCATGGCGCG GCGTGCGGGC TGCTGGGGTA TGGGTGGAAG
CTGCCGCTGG AACTGCGGTT GGTACTGCAG GATGAGCGCG CGGTGCTCTT CGATGCATCC
GGACGGGCGA TCACGTTCGA GGAGCCCTTG CAGCCGGGGC AGGCGCTGCA CAGCAGCAGC
GAGGACCTGT GGCTGTTGCG GGGTGGGGGC ATGGCTGGCT CCACGGCCCC ATCCTCCACG
CCTGCCGAAC TGCTGCCCTG GGCGCAGCAA CCGCGCTGGT CGCACGTGCC GGCGGTGCTG
CGTGCGGACC CGGGCTGCGT GATCGCCGTG CCGGGCGCGG GCGGTGCTGG TGCGCCGGTC
TGGGTGTTCC TGACGGCGGG CGTATCGGGC GACGGAACAG CTTCGGGCCA TGTCCTGCAT
GCCGTGATCG ACCGCTTCGG CCGCAGCCAG CGCTACCAGT GGGGCACGGA AGGCGAACAG
CAGGGCCGCG TCGTAGGCAT CACCGATGGC AGCGGGCGAC GCTATGCGCT GCGCTACGAG
CGCATCGCGC AGGATGCCGG GACAGCACAG ACAAGTGCCC ATCCCCTGCT GCAACCCGAC
GACGGTGTAA GGCTGGTGGG CGTGGACTGC ACCTTCAGCC CGCTCGACCC TGCAGTGATA
CCCGGCGCGG CCCCGCGCCC GCAACCCCTG GTGGGCTACC GCTACGACAG CGCAGGCAAC
CTGGCCGAGG TGCTGGGCGC GGACGGCACC GTGCTGCGCC GCTTCGGCTA CGACGCATTG
CACCGGATGA CGGAGCACCA GGTGCGCCAG GGCCCCAGGC ACCGCTACGT CTATGAGGAC
CAGACCGCGC AGGGCCGTCG CCAGGGGCTG GCGGCCCGCC CGGGTGCACG CGTGGCCGAG
CAGCACAACG AAGAGGGGCT GTCATACTTC TTCGAGTACA GCCAGGCATC CGCGCAACCT
GCGCCATCCA CGCACACCAC GCAGGCGACC CAGGGCCCGG AGGATGACCA GGATGGCCCG
ACTCCGGCCA CCGCGTCTTT GCCCAGCAAT CGCCAAAGCA GCACGTTGGT GCACGACAGC
CTGGGCCGTA CCACGGCCTA CCACTTCGAA GGCGAAGGCG GCCTCAAGCG CCTGGTGCGT
CTCGTGGCCC CGGATGGGAC CGAACAGAGC TACCGCCACG ACAGCGCCGG CCGTCGCCTC
TCGGCCACCG ATGCGCTGGG CCGCACGACG TGGTGGCGCT ACGACGGCGC GGGCCGGCTG
CTGGGTGTGC AGGGCCCGGA CGGGCGCAGC ACGCAACAGC ACTGGGGCGC GGCGGGCAGC
GCGCAGGACG GCTTGCTGTT GGCCAGCCAG GACGCGGCGG GGCTGCGCAC GCACTTCCGC
TACGACGACT GGGGCCGGCT GGTGGAGGTG GCGATGGCAC CAGCCGGGAG CGGGGACGGA
GCCACGAACA CCCAGGTCCT CACCACCCGC TTCGAATACG AACAACCCCG GCAGGATGCC
GCCACCAGCA CAACTGCCGG CAACATCGCC TTCCCACCGC ACACGCTCGC CTGGTGGGAC
CAGCCCGTGG CGATGATCGA CGCGCAGGGC GGGCGTAGCC TCTACGCCTA CAACGCCTGC
GGCCAGCTCG CGCGGCACAT CGACTGCTCC GGCCGCAGCC AGTCCTGGCG CCACGGCGCC
TGGGGCGAGG TGCTGGAGGC GACGGACGCG CTGGGCCAGC GCACCCAGCT GCACCACGTG
CTGGAGCATG GCGCGCTGCG GCTGGTGGGC GTGCAGCAGC CGGGCAACAC GGCGGTGCGC
CACCGCTGGT CGGCCGCCGG CACGCTGGAG GCGACCACCT ACGGCGCGCA CGACGTGCTG
GAAGGCACGG GCGAGCCCGC GGGCACCAGC ACGACAGTCA CCTACCGCCA CGACCTCTGG
GGCCGGGTGG TGGAGCAGGT GCAGGCGGGC CGGGGCGTGC AGCTGCGCTA CGACGTGGCC
GGGCGGCTGC AGGAACTCGT CAACGAGAAC GGCGATGTCA CACGCTTCGT GCACGACGCG
GCCGACCGGC TGGTGCAGGA AGTGGGCTTC GATGGGCGCA GCCAGGTGTA TGGCTACGAC
GCGGCCGGCC AGCTCACGCA CACGGGCGAC GGGCATGGCG AAGGCCACCA CCCGGGAGCG
GCGGCGCGGC CGGAACTCGG GGCGGTGGTG CGCACGCGGC TGCACTACGA CCTGGGCGGC
CGGCTGGTGG CGCGTGTGGC CGTACGGCTG CCGGCAGCGG CATTGGCCGG TGTTGGCGTC
AGCGTCGCAG GTGATGCGCC CGACAACCCC ACGGCTGAAC CGCATGCCGT GCTGCAGATC
CAGCGCTTCG GGCACACCGC GGCCGGAGCC CTGCTGCAGG CGCGGACCTG GGAGACAGAA
CTGCCCCACG GGATCGAGCC CATGGCCCTG CCAACGGCCC TGTCTCCCGA CTCCTCGCGC
CCAGGCGCTG CCACGGACCG ACCCATCCCC CTCGCCGAGC GCTGGCTGGC ACTGGACACG
CAGGCACTGT TGTCCCTGCT GGACCGCCCC AGCGATCCGA CCCAGGCCCC GCTGGCAGCC
GCGCTGCAGG CGCAGCGGCT GCAGCCCGAG GCCCGCGTGG CCCTGGCGCG CGATGCCTTC
GGGCGTGTCT GTGGAGAGAC CCAGACGCTG TACCGGCAGG CCACCCAGCC GCAAGCGCCC
CATGCCGGCG GCGAGCCGCC CGTGGAGTTC GAGCACGCGA TCACCCACAC GCTGGGCCCG
CTGGGCCAGC GCACGGCCAC TCAGGCGCAG GGCCTGGGCA CGCTGCAGTG GCTGGCCTAC
GGCTCGGGCC ATGTGCACGG GCTGCTGCTG GACGGCCAGC CGCTGGTGGA CTGGGAGCGC
GATGCGCTGC ACCGCGAGGT GGGGCGTACG CTGCACGTGC TCGAAGGCAA AGACAACGAA
GACCTGCACG CCATCGTGCA TGCGCGGCAG CTCGACCCGA TGGGCCGCAT GCTGCACCAG
GACTGGCGCG GCCTGCGCCA TGCGACGCCG GTGGTTCCTG CCGACCCGGC CAACGCCTTC
GGAACGGGTC CTTCGTCCGC CGCGGGCCGC ATCGCCCCGG CCCTGGGCCC GCTGTCCACG
CTCGCGCAGC GCCGCTACTG GTACGACCCG CTGGGCCAAC TGGTCGGCGT GCAGACCCCG
GGCGAAGCCA CGCGCTACGG CTACGACGCC TGGCAGCGCC TGAGCGGGCT GCACCGCGCG
GGCCAGGGTA CGCCGGAAGT GCAAGCGCAC TGGGCGCTGG ACGCGGCGGG CAACCGCCTG
CCCGCGTCCC TGGATGCGCG CGCGGCCGGG TCTTCTGCGA GCGAGCGCCA GGGCTGGGCA
CGGCAGGTGC GCGAGAACCT GCACGATGCG GACTTCGACC TGCTGCGCGC GGGCGACGGG
CCCGGCGAAG GTGCAGGCCC GGTCACGCGC TGGCCGGGCA ACCGCATCGG GTGGAGCACC
CCCGAACCGG ATGCCGATGG CACCAGCATC GCTGGCAGCG ACGGCAACGG CAACGGCAAC
GGCAACGGCA ACGGCAACGG CAACGGCATC CTGATCCGCT ACCGCTACGA CGCCTTCGGC
AACCGGGTGC AGGCGCTGCA CGCCGACGGC CGGGCGCAGC GGCTGCGCTA CGACGCGCTG
CACCAATTGC GCGAGGTCTG GCAGCGCGAG GCAGCGGGTG GCGCCTGGCA GCGGGTGGCC
TGCTACCGCT ACGACCCCTT CGGGCGGCGG CTGGCCAAGA CCGTCTTCGG GCACGGCAAC
AGAAGCCGAA ACGGCAACGC ACCTGCATCG GGACCGGCGA CCACCACCTA TGCCGGCTGG
GACGGCGACC GCCTCGTGCA CAACGAAGGC CCGCAGGGGC TGCAGCACGT GCTCTACGAG
CCCGGCTCCT TCGCGCCGCT GCTGCGCCTG GAGCGCGAGC AGGCCATTCC CACGGCCATG
CAGGCCATGC TGGTGATGGA AGAAAACCGT GGAAGCATCG CCAATGATGG TCCGGATGGC
GGTGAATTCC CCGCCGCAGC CCTGTTCGCG GGCCTGCCGC GAGCCCAGCG CGAACTGCTT
GAGCGTGCCC TGCACGACGC CACGGGCCCC CAGGGGGATG CACTACTGGC GCGCCTGCGG
GCAGGCCTAC CCGATGAGGC CGGCGCATTG CTGGCTGCGG GGGTGCAGTC CGTGCGCCGG
CAACAGCAGG TCGCCACGCA AGCCCACTCG ACGCGTATCC GCCATTTCCT GTGCGATCAC
CTGGGCACGC CTATTGCCTT GGTGGACGCC AACGGCCCGC AGGCGGGCCT GGTCACCTGG
GCCGCGACCT ACCACGCCTG GGGTGCCGTG CGCGAGGAAT ACGACCCGCA CGGCATCGGC
CAGGACATCC GTTTCCAGGG CCAGCAGCTC GATGTGGAGA CAGGGTTGCA CTACAACCGG
TTCCGGTACT ACGACCCCCT GCTGGGGCAG TATGTGACGC AGGATCCGAT TGGGCTGCTT
GGCGGCTTGA ATAAGTTCAC CTATCCGGGA AACCCGATAA GCTGGATAGA CCCCCTGGGA
TTGTCTGGAA TATTGACCAT CCAATCTTCA GGCAATGGAA ATCCGTTGTC TGGCCATTCA
TGGATAACGT ACGCTCCAGA TGGCGGTTAT CCGACTACCT ATGGTACTTG GGGGAATAAT
CCCACGGGCC AAGGAAATGG GCTCTTCGAG AATTTAGAGA TTGGCCGTAA TGCAGATGCC
ACGCGATCTA TGCGAATCAA CGATGAACAA GAGAAGGAGT TGATGGCGAA AATTGAAGAC
TACAAGAATA GGAAAGAAAA CGCCTGGAAG CTTGGTGCTC CATGCTCGAG CTTTGCAAGA
GATGCTTGGC AGACTGCAAC GGGTGAAAAT TTGAACTCGA ACCTTGGCCC CATCAGTAAC
CCGAGTACTC TAAAGAATTC GATTATTAAT GCGAATGGAG GGAAGGTAAG TGAATTCGCA
ACCAAGCCCA ACGGGACTTC AAGTGCGTCC TTCGGTTCTT TTGGTCGCTC TTCAGGTAGT
GTTTCACTAA ACTCACTTGG CAGTTCTTTA TGA
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| Protein sequence | MSGKPAARQG DLTKKGGPIV QGSATVLIGS AGGVACSVCP GGMAVGNPVN PALGAKVLTG
GDELDFALPG PLPLAWQRVY SSYVNAEHGA ACGLLGYGWK LPLELRLVLQ DERAVLFDAS
GRAITFEEPL QPGQALHSSS EDLWLLRGGG MAGSTAPSST PAELLPWAQQ PRWSHVPAVL
RADPGCVIAV PGAGGAGAPV WVFLTAGVSG DGTASGHVLH AVIDRFGRSQ RYQWGTEGEQ
QGRVVGITDG SGRRYALRYE RIAQDAGTAQ TSAHPLLQPD DGVRLVGVDC TFSPLDPAVI
PGAAPRPQPL VGYRYDSAGN LAEVLGADGT VLRRFGYDAL HRMTEHQVRQ GPRHRYVYED
QTAQGRRQGL AARPGARVAE QHNEEGLSYF FEYSQASAQP APSTHTTQAT QGPEDDQDGP
TPATASLPSN RQSSTLVHDS LGRTTAYHFE GEGGLKRLVR LVAPDGTEQS YRHDSAGRRL
SATDALGRTT WWRYDGAGRL LGVQGPDGRS TQQHWGAAGS AQDGLLLASQ DAAGLRTHFR
YDDWGRLVEV AMAPAGSGDG ATNTQVLTTR FEYEQPRQDA ATSTTAGNIA FPPHTLAWWD
QPVAMIDAQG GRSLYAYNAC GQLARHIDCS GRSQSWRHGA WGEVLEATDA LGQRTQLHHV
LEHGALRLVG VQQPGNTAVR HRWSAAGTLE ATTYGAHDVL EGTGEPAGTS TTVTYRHDLW
GRVVEQVQAG RGVQLRYDVA GRLQELVNEN GDVTRFVHDA ADRLVQEVGF DGRSQVYGYD
AAGQLTHTGD GHGEGHHPGA AARPELGAVV RTRLHYDLGG RLVARVAVRL PAAALAGVGV
SVAGDAPDNP TAEPHAVLQI QRFGHTAAGA LLQARTWETE LPHGIEPMAL PTALSPDSSR
PGAATDRPIP LAERWLALDT QALLSLLDRP SDPTQAPLAA ALQAQRLQPE ARVALARDAF
GRVCGETQTL YRQATQPQAP HAGGEPPVEF EHAITHTLGP LGQRTATQAQ GLGTLQWLAY
GSGHVHGLLL DGQPLVDWER DALHREVGRT LHVLEGKDNE DLHAIVHARQ LDPMGRMLHQ
DWRGLRHATP VVPADPANAF GTGPSSAAGR IAPALGPLST LAQRRYWYDP LGQLVGVQTP
GEATRYGYDA WQRLSGLHRA GQGTPEVQAH WALDAAGNRL PASLDARAAG SSASERQGWA
RQVRENLHDA DFDLLRAGDG PGEGAGPVTR WPGNRIGWST PEPDADGTSI AGSDGNGNGN
GNGNGNGNGI LIRYRYDAFG NRVQALHADG RAQRLRYDAL HQLREVWQRE AAGGAWQRVA
CYRYDPFGRR LAKTVFGHGN RSRNGNAPAS GPATTTYAGW DGDRLVHNEG PQGLQHVLYE
PGSFAPLLRL EREQAIPTAM QAMLVMEENR GSIANDGPDG GEFPAAALFA GLPRAQRELL
ERALHDATGP QGDALLARLR AGLPDEAGAL LAAGVQSVRR QQQVATQAHS TRIRHFLCDH
LGTPIALVDA NGPQAGLVTW AATYHAWGAV REEYDPHGIG QDIRFQGQQL DVETGLHYNR
FRYYDPLLGQ YVTQDPIGLL GGLNKFTYPG NPISWIDPLG LSGILTIQSS GNGNPLSGHS
WITYAPDGGY PTTYGTWGNN PTGQGNGLFE NLEIGRNADA TRSMRINDEQ EKELMAKIED
YKNRKENAWK LGAPCSSFAR DAWQTATGEN LNSNLGPISN PSTLKNSIIN ANGGKVSEFA
TKPNGTSSAS FGSFGRSSGS VSLNSLGSSL
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