Gene Aave_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2036 
Symbol 
ID4666544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2217118 
End bp2218233 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content73% 
IMG OID639823246 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_970393 
Protein GI120610715 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.069158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCA CTACACCGCG CCACCTCGTC CGCCACGGCC TGCTCGTGGC CGCCTTCTGC 
TGCGCCATCG CCGCGATCCA GGTGGCCTAC GGCCGGGGGC CCTGGCATGC ACAGGCGGTG
TATTCGCTCT CGATCGGCCT GAGCAGCTGG CTGCTCATCG AGGCGGGCCG GTTCTGGCTC
ACGCGCCGCA GCCCCATTCC CTGGCCGTTG GGCTGGCGCG GCTGGGCGCT GGTGGCCGCT
GGCGGCACGA TCGGCTTCCA GGTCGGCTCG GCCATCGGCG ACGCCTACTG CAGCGCCATC
GGCCTGACGC GACCGGTCTC TCCGTCGCCG GGCGCCCCGG GCCCGGCGGT CATCACGACG
ATGCTCGCCT GCCTGGCGAT CTCGCTCTTC TTCTACGCGC AGGGCAAGGC GCGCTACCTG
GAAGGCCGCA TCGCCGAGGC GCAGCGGGAC GCGGCCGAGG CGCGGCTGCG GCTGCTGCAG
ACGCAGCTGG AGCCGCACAT GATGTTCAAC ACCCTGGCCA ACCTGCGCAT GCTCATCGCG
GCCGACCCAT TGCGCGCACA GGCCATGCTG GACCACTTCA TCGCCTACCT GCGCGCCACC
CTGGGCGCTT CGCGCGCGAC CGCGCATCCG CTGGTCGACG AGTTCGAACT GCTGCGCGAT
TACCTGGAAC TCATGTCCGT GCGCATGGGC GCGCGGCTGG CGTACACAAT CGACCTGCCC
GCGCCGCTGC GCGACGTGCC CGTGCCGCCC CTGCTGCTGC AGCCGCTGGT GGAAAACGCC
ATCCGCCACG GGCTGGAGCC GCAGGTGGAA GGCGGACGCA TCACGGTGGC CGCGCGCACG
CTGCCCGGCG CGCCCGACCG GCTGGAGCTG GCCGTCCACG ACACCGGCGC GGGGCTGGGC
GAGCTTCCCG TGCAGCCCGG CAGCCGCTTC GGCCTCGCCC AGGTGCGCGA ACGCCTCGCC
ACACTGCGGG GACCGGCGGC CATGCTGGAG CTGGGCCCGG GCGACGGCGG CCGCGGCACG
CGGGTGCGCA TCGTCCTTCC GCTGGAAAGG TCGGCCGCGG CCGCATCCAC CACCCCTTTG
ACCGGACCGC CGCCATGCAC GCCCCCCGCG CCCTGA
 
Protein sequence
MPPTTPRHLV RHGLLVAAFC CAIAAIQVAY GRGPWHAQAV YSLSIGLSSW LLIEAGRFWL 
TRRSPIPWPL GWRGWALVAA GGTIGFQVGS AIGDAYCSAI GLTRPVSPSP GAPGPAVITT
MLACLAISLF FYAQGKARYL EGRIAEAQRD AAEARLRLLQ TQLEPHMMFN TLANLRMLIA
ADPLRAQAML DHFIAYLRAT LGASRATAHP LVDEFELLRD YLELMSVRMG ARLAYTIDLP
APLRDVPVPP LLLQPLVENA IRHGLEPQVE GGRITVAART LPGAPDRLEL AVHDTGAGLG
ELPVQPGSRF GLAQVRERLA TLRGPAAMLE LGPGDGGRGT RVRIVLPLER SAAAASTTPL
TGPPPCTPPA P