Gene Aave_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1963 
Symbol 
ID4667840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2133811 
End bp2134338 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID639823173 
Productglobin 
Protein accessionYP_970321 
Protein GI120610643 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.230814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0183414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCC TCCGTTACGC CGTGGCCGCG GGCGCGGCCT TTCTCGCCTG CGGCGGCCTG 
CCGGGCGCCA TCGTGCCTGC CCATGCGCAG GACGCGCCGC CGACCCAGGC CCTCCTCATT
CCCCCGCCGG TCCCGCGCCA GCCGGTCGAT ACCTCGGTGC TGCCGGCACC CCCCGGCCTC
TACGAAGCGC TGGGCGGGCG CGAGCGCATC GCCCGCGTGG TGGACCGGCT CATCGATGCC
GCCGTCGTGC ATCCGCAGAT CGGCCCGATC TTCAAGGGGG TGCGCCCGCG CGCGCTCAAG
GACAGCATCG CCGCGCAACT GTGCGTGGTG ACCGGCGGGC CCTGCGAATA CGAAGGCGTC
AGCATGAAGG ACGCCCATGC CGACCTGCGC ATCCGCCGGA GCGATTTCAA CGTGCTGGTG
GAATTGCTGC AGGATGCCAT GGACGCCGAG GGCATTCCCT TCGCGCAGCA GAGCCGGCTG
CTGGCGCTCC TGGCGCCCAT GCACCGCGAC ATCATCACCG TCCGCTGA
 
Protein sequence
MIFLRYAVAA GAAFLACGGL PGAIVPAHAQ DAPPTQALLI PPPVPRQPVD TSVLPAPPGL 
YEALGGRERI ARVVDRLIDA AVVHPQIGPI FKGVRPRALK DSIAAQLCVV TGGPCEYEGV
SMKDAHADLR IRRSDFNVLV ELLQDAMDAE GIPFAQQSRL LALLAPMHRD IITVR