Gene Aave_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1897 
Symbol 
ID4669296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2053939 
End bp2054442 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content69% 
IMG OID639823106 
Producthypothetical protein 
Protein accessionYP_970255 
Protein GI120610577 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.192934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0886896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TTCTTTCCTC TTCCCTGATC GCCATCGCCA CCCTGGCCAG CCTGTCCGCG 
CACGGCCAGA CCGCCACCGT CCAGGACGCC TGGGTCCGGG CCACCGTGCC CCAGCAAAAG
GCGACCGGCG CCTTCATGAA GATCACCGCC GCCAGGCCGA TGAAGCTCGT CGGCGTGAAG
TCCCCCGCGG CCCCCGTGGC GGAAATCCAC GAAATGCGGC TGCAGGACAA CGTCATGAAA
ATGCGGCCCG TGGACAAGCT CGACCTTCCG GCGGGCCAGG CCGTGGAACT CAAGCCCGGC
GGCTACCACG TCATGCTCAT GGACCTGGCC AAGCCGGTGA AGGCGGGCGA TACCGTGCCC
CTGCAGCTCG TGCTGGAAGG CCCGGACGGC CAGCGCCAGA CGGTGGACGT GCAGGCTCCC
GTGCGCGCCC TGGGCACGAC CGGGAACAAT GCCCCGGCGC AGGACGCCCC CGCCCATGCG
GGCCATGGCG CGCACCAGCA CTGA
 
Protein sequence
MKRILSSSLI AIATLASLSA HGQTATVQDA WVRATVPQQK ATGAFMKITA ARPMKLVGVK 
SPAAPVAEIH EMRLQDNVMK MRPVDKLDLP AGQAVELKPG GYHVMLMDLA KPVKAGDTVP
LQLVLEGPDG QRQTVDVQAP VRALGTTGNN APAQDAPAHA GHGAHQH