Gene Aave_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1585 
Symbol 
ID4669098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1751150 
End bp1751869 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID639822787 
Producthypothetical protein 
Protein accessionYP_969948 
Protein GI120610270 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0198328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC TCGCCCCCCT GGCCGCCGCC TGCGCCATCG CCGCCGTGTC GGGCACGGCA 
TTTGCCCAGA ACGTGGCCGC GCCGGCGCCC CAGAACGTGC TGCAGCTCGC CGCGAGCGGC
TCGGTGGACG TCCAGCAGGA CCTGCTGGTG CTGACCCTGG CCGCTACGCG CGAGGGCGCG
GATGCCGCCA CCGTGCAGAC GCAACTGCGG CAGGCGCTGG ATGCCGGCCT GGCCGAAGCC
AAGCGCGCCG CGCAGCCCGA ACAGATGGAG GTGCGCACCG GCCAGTTCGG CCTGTATCCG
CGCTACGGCA AGGACGGCAA GATCACCGCC TGGCAGGGAC GTGCCGAACT GGTGCTGCAG
GGGCGCGACT TCTCGCGCAT CACCACCACG GCCGGCCGCA TCCAGTCCAT GCCCATCAGC
CAGATCGCGT TCGACCTGTC CAAGGAGGCC CGGGCGCGTG TCCAGGCCGA GGCCCAGACG
CGGGCCATCG AGGAGTTCAA GAACCGCGCG GGCGAACTGG CCAAGGGCTT CGGCTTCTCG
GGCTATTCGC TGCGTGAGGT GTCGGTCAAC AGCGACGAGG TGTCGCCCGG ACCACGCGCG
CCCCGCATGA TGGCCGTACA GGCCAAGTCG GCCATGGCTT CCGCCGACGA GTCCGTGCCG
GTCGAGGCCG GCAAGACCCA GGTGGTGGTC CACGTCTCCG GGTCGGTGCA GCTGCGCTGA
 
Protein sequence
MKFLAPLAAA CAIAAVSGTA FAQNVAAPAP QNVLQLAASG SVDVQQDLLV LTLAATREGA 
DAATVQTQLR QALDAGLAEA KRAAQPEQME VRTGQFGLYP RYGKDGKITA WQGRAELVLQ
GRDFSRITTT AGRIQSMPIS QIAFDLSKEA RARVQAEAQT RAIEEFKNRA GELAKGFGFS
GYSLREVSVN SDEVSPGPRA PRMMAVQAKS AMASADESVP VEAGKTQVVV HVSGSVQLR