Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1585 |
Symbol | |
ID | 4669098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1751150 |
End bp | 1751869 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822787 |
Product | hypothetical protein |
Protein accession | YP_969948 |
Protein GI | 120610270 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0198328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCC TCGCCCCCCT GGCCGCCGCC TGCGCCATCG CCGCCGTGTC GGGCACGGCA TTTGCCCAGA ACGTGGCCGC GCCGGCGCCC CAGAACGTGC TGCAGCTCGC CGCGAGCGGC TCGGTGGACG TCCAGCAGGA CCTGCTGGTG CTGACCCTGG CCGCTACGCG CGAGGGCGCG GATGCCGCCA CCGTGCAGAC GCAACTGCGG CAGGCGCTGG ATGCCGGCCT GGCCGAAGCC AAGCGCGCCG CGCAGCCCGA ACAGATGGAG GTGCGCACCG GCCAGTTCGG CCTGTATCCG CGCTACGGCA AGGACGGCAA GATCACCGCC TGGCAGGGAC GTGCCGAACT GGTGCTGCAG GGGCGCGACT TCTCGCGCAT CACCACCACG GCCGGCCGCA TCCAGTCCAT GCCCATCAGC CAGATCGCGT TCGACCTGTC CAAGGAGGCC CGGGCGCGTG TCCAGGCCGA GGCCCAGACG CGGGCCATCG AGGAGTTCAA GAACCGCGCG GGCGAACTGG CCAAGGGCTT CGGCTTCTCG GGCTATTCGC TGCGTGAGGT GTCGGTCAAC AGCGACGAGG TGTCGCCCGG ACCACGCGCG CCCCGCATGA TGGCCGTACA GGCCAAGTCG GCCATGGCTT CCGCCGACGA GTCCGTGCCG GTCGAGGCCG GCAAGACCCA GGTGGTGGTC CACGTCTCCG GGTCGGTGCA GCTGCGCTGA
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Protein sequence | MKFLAPLAAA CAIAAVSGTA FAQNVAAPAP QNVLQLAASG SVDVQQDLLV LTLAATREGA DAATVQTQLR QALDAGLAEA KRAAQPEQME VRTGQFGLYP RYGKDGKITA WQGRAELVLQ GRDFSRITTT AGRIQSMPIS QIAFDLSKEA RARVQAEAQT RAIEEFKNRA GELAKGFGFS GYSLREVSVN SDEVSPGPRA PRMMAVQAKS AMASADESVP VEAGKTQVVV HVSGSVQLR
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